DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and alpha-Man-Ib

DIOPT Version :9

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster


Alignment Length:712 Identity:227/712 - (31%)
Similarity:345/712 - (48%) Gaps:119/712 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCFRMPTLVICGVV--LTIILVCITGITLTNSINISNIVKLREKVASDSAAANGGHQ-------- 59
            :|.|  .|:|.|:.  ...:|:|::|..|. :.::.::....|..|......|..|.        
  Fly    36 RCQR--NLIILGITGFCVTVLLCLSGDQLL-AASLKDVDTKAEVAAYQMPLPNPHHHPGVDKDVP 97

  Fly    60 --------AAQTRAALVEQQYSTLQQHHLSRSD-LNYIQA---ATHPKNLQRQLQQQQQQQLQQQ 112
                    .|..||..||           :.|| .|.:.|   |...:|:.|             
  Fly    98 KDTAAVPVPADKRAPRVE-----------AVSDKFNELVAYGEANSAENVAR------------- 138

  Fly   113 QPNKIVIEIGLSNDSGPSSA--PASSTLGSSSTGPRIL---------QAAEALMEGNVDSISLPA 166
            .|..:..| ||...|..:.|  |..|.......|..||         ..||.|.||  :.:....
  Fly   139 LPETVAAE-GLPQASAMAVALPPPDSNKEQDIGGIDILNNVEEPVAQDPAEPLSEG--EQLEQAI 200

  Fly   167 AAPLTAATTSSAKSLEN-----SQGSDTPHSHANTTNADITMGIADHNPGGIQFERRAHVKQMME 226
            ..|||....|..:.|:.     ::|.   |.|..|.                  ||::.|....:
  Fly   201 KNPLTLGGVSFKEHLKKIKPILAKGQ---HFHGATN------------------ERQSAVVAAFK 244

  Fly   227 HAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYREGRDWIERKF 291
            |:|..||.||||.:.|:|:||..|  ..||   ||.||||.|||:|||||:.|::|||||:|:..
  Fly   245 HSWAGYKKYAWGHDNLKPISQYSH--EWFG---LGLTIVDSLDTMYIMGLDDEFKEGRDWVEQSL 304

  Fly   292 SLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQHVADKLLPAFQTPTGIPYALVNTKTG 356
            ..|. ..::::||..||.:||:|:.|..:||.::..||..:.::||||||:|:.|||:.||....
  Fly   305 RFDT-KRDVNLFEVTIRVLGGLLSAYHLSGDTMFLAKAAELGNRLLPAFQSPSNIPYSDVNLGDL 368

  Fly   357 VAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRERVQTIRQVLKEIEKPKGLYPNFLNPK 421
            .|.:..|:...|:  ||..|:.|||..||..|...:|.:....:.:.:.::||..||.|.|:|..
  Fly   369 SAHSPKWSPDSST--SEVTTIQLEFRDLSRSTNISIYEQVAHKVNEKVHDLEKNHGLVPIFINAN 431

  Fly   422 TGKW-GQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREM-FDEAMLAILDKMVRTSP------- 477
            ||.: ....:||||.||||||||||.|:|:|:.|.:...: :.:|:..:|.:::|.:|       
  Fly   432 TGTFRNYATISLGARGDSYYEYLLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMRRTPREHWVYI 496

  Fly   478 GGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDYTDKYMEVGKGITNTCHESYIRAPTQ 542
            |.|....|.|     .|||||.|:..|...||   .||...|.::.:.:.:.:||:::|:..||.
  Fly   497 GELINGKDFK-----PKMDHLTCYLPGTLILG---HQNGMPDSHLILARDLLDTCYQTYMMNPTH 553

  Fly   543 LGPEA--FRFSEAVEARA-LRSQEKYYILRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCR 604
            |..|.  |..:|..:... ::..:.:.:||||..||.:..:.:|.::.|:|.||:...|.|.|.:
  Fly   554 LAAEISYFALTEKDDQDIYVKPNDAHNLLRPEFVESLYYFYSITGNRTYQDMGWKIFQAFETHAK 618

  Fly   605 TAHGYCGLRNVYQ-QEPQKDDVQQSFFLAETLKYLYLLFSDD-SVLPLDEWVFNTEAHPLPI 664
            ...||..:.||.. |..:..|:.:||:::|||||.||||||| ..:.|::||||:|.||||:
  Fly   619 VNAGYTSMGNVKNTQSTRLRDLMESFWMSETLKYFYLLFSDDRKEIDLEQWVFNSEGHPLPV 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 Glyco_hydro_47 224..664 CDD:279825 173/453 (38%)
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:279825 173/453 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453085
Domainoid 1 1.000 265 1.000 Domainoid score I293
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46690
orthoMCL 1 0.900 - - OOG6_100239
Panther 1 1.100 - - P PTHR11742
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R728
SonicParanoid 00.000 Not matched by this tool.
87.880

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