DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and edem2

DIOPT Version :9

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001292543.1 Gene:edem2 / 402801 ZFINID:ZDB-GENE-060519-1 Length:560 Species:Danio rerio


Alignment Length:494 Identity:157/494 - (31%)
Similarity:226/494 - (45%) Gaps:99/494 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYRE 282
            |..||.|..||:::|...|:..:|||||:  ......:||:.|  |::|.||||.|:|...|::.
Zfish    36 RDRVKSMFYHAYNSYLDNAYPYDELRPLT--CDGQDTWGSFSL--TLIDALDTLLILGNHTEFQR 96

  Fly   283 GRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFT-------------GDPLYKEKAQHVAD 334
            ....::.....| |....||||||||.|||:|:.:..:             ..||.: .|:..|.
Zfish    97 VATLLQDTVDFD-IDVNASVFETNIRVVGGLLSAHLLSKRAGMKVEEGWPCSGPLLR-MAEDAAR 159

  Fly   335 KLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRERVQT 399
            |||||||||||:||..||...||  |.|  ....:..:..||..|||:.||.:||:|::....:.
Zfish   160 KLLPAFQTPTGMPYGTVNLLRGV--NPG--ETPVTCTAGVGTFILEFSTLSRLTGDPVFENVARK 220

  Fly   400 IRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKA--WLQSGQTDEEAREMFD 462
            ..:.|.......||..|.::..|.||......:||..|||:|||:|.  .||    ||:...||.
Zfish   221 ALRALWRTRSDIGLVGNHIDVITSKWVAQDAGIGAGVDSYFEYLVKGAIMLQ----DEKLLTMFY 281

  Fly   463 EAMLAILDKMVRTSPGGLTYVSDLKFDR-----LEHK-------MDHLACFSGGLFALGAATRQN 515
            |     .||.::      .|.   |||.     ..||       ...|..|..|:.:|       
Zfish   282 E-----FDKSIK------NYT---KFDDWYLWVQMHKGTVSMPVFQSLEAFWPGMQSL------- 325

  Fly   516 DYTDKYMEVG--KGITNTCHESYIRAPTQLG--PEAFRFSEAVEARALRSQEKYYILRPETFESY 576
                    :|  ...|.:.| :|.....|.|  ||.:...:....    .:.:.|.||||..||.
Zfish   326 --------IGDISSATKSFH-NYYSVWRQFGGLPEFYSIPQGYTV----DKREGYPLRPELIESA 377

  Fly   577 FVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLL 641
            ..|::.|.|..:...|.:||.::::..|...|:..:::|  ::.:.|:..:|||||||:||||||
Zfish   378 MYLYKATGDPSFIQLGRDAVESIDRISRVNCGFATVKDV--RDHKLDNRMESFFLAETIKYLYLL 440

  Fly   642 FSDDS------------------VLPLDEWVFNTEAHPL 662
            |..|:                  :|....:|||||||||
Zfish   441 FDPDNFLHNTGTEFELGGLRGDCILSAGGYVFNTEAHPL 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 Glyco_hydro_47 224..664 CDD:279825 154/488 (32%)
edem2NP_001292543.1 Glyco_hydro_47 42..479 CDD:279825 152/486 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583839
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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