DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and Man1c1

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_063144134.1 Gene:Man1c1 / 362625 RGDID:1309672 Length:655 Species:Rattus norvegicus


Alignment Length:633 Identity:280/633 - (44%)
Similarity:379/633 - (59%) Gaps:86/633 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 HPKNLQRQLQQQQQQQLQQQQPN-KIVIEIG-----LSNDSGPSSAPASSTLGSSS--------- 142
            |...|:|.....     :.|||. :::.||.     ...:..|:.|||:...|...         
  Rat    45 HSSRLKRLFSAS-----RTQQPGLEVMAEIAGHHSVSEQEPPPNPAPAAPAPGEDDSGRLVGVLR 104

  Fly   143 ----------TGPRILQAAEALMEGNVDSISLPAAAPLTAATTSSAKSLENSQGSDTPHSHANTT 197
                      ||||        .|||    .:.|..|...:...|..  .||..|...|....|.
  Rat   105 RKGWLRRTRPTGPR--------EEGN----RVSALRPQEESVRFSFD--YNSFRSRLRHPVLGTR 155

  Fly   198 NADITMGIADHNPGGIQFERRAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGA 262
            ..:      ......:...:|..:|:||..:|.:|:.||.||||||||::.....|:||... ||
  Rat   156 TDE------SQESQSLVRAQREKIKEMMRFSWQSYRRYAMGKNELRPLTKDGFEGSMFGGLS-GA 213

  Fly   263 TIVDGLDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKE 327
            ||:|.|||||:|.|::|::|.:.|::..|.| |:|.|.|:||.|||::||:|:.:..||:.:::.
  Rat   214 TIIDSLDTLYLMELKEEFQEAKAWVQDSFHL-NVSGEASLFEVNIRYIGGLLSAFYLTGEEVFRV 277

  Fly   328 KAQHVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWA-SGGSSILSEFGTLHLEFAYLSDITGNP 391
            ||..:.:||||||.||||||..:||.|:|   ::||| :|.||||:|||:|||||.:|::::|||
  Rat   278 KAIKLGEKLLPAFNTPTGIPKGVVNFKSG---SWGWATAGSSSILAEFGSLHLEFLHLTELSGNP 339

  Fly   392 LYRE------------------------------RVQTIRQVLKEIEKPKGLYPNFLNPKTGKWG 426
            ::.|                              ||:.||:||:||:||.|||||||:|.:|.|.
  Rat   340 IFAEKVLSGSCWQQAGGRLAELIPRHCSWLPKATRVRNIRKVLREIDKPFGLYPNFLSPVSGNWV 404

  Fly   427 QLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMFDEAMLAILDKMVRTSPGGLTYVSDLKFDRL 491
            |.|:|:|.||||:||||:|:||.|.:||.||:.|:.||:.||...:|..|||||||:::.:...|
  Rat   405 QHHVSVGGLGDSFYEYLIKSWLMSAKTDMEAKTMYYEALEAIETYLVNVSPGGLTYIAEWRGGIL 469

  Fly   492 EHKMDHLACFSGGLFALGAATRQNDYTDKYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEA 556
            :|||.||||||||:.||||...:.|....|.|:...||.||||||.|:.|:||||||.|:...||
  Rat   470 DHKMGHLACFSGGMIALGAEDAKEDKRAYYRELAAQITRTCHESYARSDTKLGPEAFWFNSGREA 534

  Fly   557 RALRSQEKYYILRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQ 621
            .|.:..|.|||||||..|||..|||.|||..||:||||.|:||||||||..|:.|:::||...|.
  Rat   535 VATQLSESYYILRPEVVESYMYLWRQTHDPIYREWGWEVVMALEKHCRTEGGFSGIQDVYSSNPN 599

  Fly   622 KDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGANA 669
            .|:.||||||||||||||||||:|.||.|::|||||||||||:..:::
  Rat   600 HDNRQQSFFLAETLKYLYLLFSEDDVLSLEDWVFNTEAHPLPVNRSDS 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 251/478 (53%)
Man1c1XP_063144134.1 None

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