DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and Edem1

DIOPT Version :9

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001259152.1 Gene:Edem1 / 31154 FlyBaseID:FBgn0023511 Length:1004 Species:Drosophila melanogaster


Alignment Length:494 Identity:165/494 - (33%)
Similarity:234/494 - (47%) Gaps:90/494 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 QFERRAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEK 278
            :.|.|..|::|.:||:..|..:|...:|||||:...|..  :|||.|  |::|.||||..||...
  Fly    38 KLELREDVRRMFQHAYDGYLRHASNYDELRPLTCDGHDT--WGSYSL--TLIDALDTLATMGNFT 98

  Fly   279 EYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFT-------------GDPLYKEKAQ 330
            |:|.....:|.|...|. ...:||||||||.|||:|:.:..:             ..||.: .|:
  Fly    99 EFRRAARLLEEKMDFDR-DINVSVFETNIRIVGGLLSAHLLSKRAGVELEPGWPCKGPLLR-LAE 161

  Fly   331 HVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSI--LSEFGTLHLEFAYLSDITGNPLY 393
            .||.:|||||.|.||:||..||.:.||.|      |.:||  .:..||..:||..||.:||..:|
  Fly   162 DVARRLLPAFVTNTGMPYGTVNLRYGVPK------GETSITCTAGVGTFLIEFGTLSRLTGKTIY 220

  Fly   394 RERVQTIRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAR 458
            .:........|.....|.||:.|.::.::|:|..|...:||..||.:|||:||.:...:  .|..
  Fly   221 EDVAMKAVHALWAYRSPIGLFGNHIDVQSGRWTALDSGIGAGVDSLFEYLVKASVLLNR--PELL 283

  Fly   459 EMFDEAMLAILDKMVR---------TSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQ 514
            |:|.||..|| ||.:|         .:.|.:|..   .|..||      |.:.|.|..:|.....
  Fly   284 ELFHEARAAI-DKYMRKEDWYVWVGMNKGRVTLP---VFQSLE------AFWPGILSIIGDTEPA 338

  Fly   515 NDYTDKYMEVGKGITNTCHESYIRAPTQLG--PEAFRFSEAVEARALRSQEKYYILRPETFESYF 577
            .....:|:.|.|               :.|  ||.:..: |.||...|   :.|.||||..||..
  Fly   339 LRTISRYIGVWK---------------KYGFLPEFYNIA-AGEASPNR---EVYPLRPELIESAM 384

  Fly   578 VLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLF 642
            .|:|.|.::...::|...:..||...:|..||..:|||...|  |::..:|||||||.|||||||
  Fly   385 YLYRATGNEYLLEFGEHMLETLEFSAKTKCGYATIRNVVTHE--KENRMESFFLAETSKYLYLLF 447

  Fly   643 SDDSVLPLD-------------------EWVFNTEAHPL 662
            .:::.|..|                   .::|||||||:
  Fly   448 DEENFLHNDGSGGELLSTEDDVCVVQAGAYIFNTEAHPM 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 Glyco_hydro_47 224..664 CDD:279825 162/484 (33%)
Edem1NP_001259152.1 Glyco_hydro_47 48..486 CDD:279825 161/482 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453089
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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