DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and Edem2

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001004230.1 Gene:Edem2 / 296304 RGDID:1303074 Length:576 Species:Rattus norvegicus


Alignment Length:494 Identity:161/494 - (32%)
Similarity:230/494 - (46%) Gaps:98/494 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYRE 282
            |..||.|..||:.:|...|:..:|||||:...|..  :||:.|  |::|.||||.|:|...|::.
  Rat    36 RERVKAMFYHAYDSYLENAFPYDELRPLTCDGHDT--WGSFSL--TLIDALDTLLILGNTSEFQR 96

  Fly   283 GRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFT-------------GDPLYKEKAQHVAD 334
            ..:.::.....| |....||||||||.|||:|:.:..:             ..||.: .|:..|.
  Rat    97 VVEVLQDNVDFD-IDVNASVFETNIRVVGGLLSAHLLSKKAGVEVEAGWPCSGPLLR-MAEEAAR 159

  Fly   335 KLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRERVQT 399
            |||||||||||:||..||...||  |.|  ....:..:..||..:|||.||.:||:|::.:..:.
  Rat   160 KLLPAFQTPTGMPYGTVNLLHGV--NPG--ETPVTCTAGIGTFIVEFATLSSLTGDPVFEDVARV 220

  Fly   400 IRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKA--WLQSGQTDEEAREMFD 462
            ....|.|.....||..|.::..||||......:||..|||:|||:|.  .||    |::...||.
  Rat   221 ALMRLWESRSDIGLVGNHIDVLTGKWVAQDAGIGAGVDSYFEYLVKGAILLQ----DKKLMAMFL 281

  Fly   463 EAMLAILD-----------KMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQND 516
            |...||.:           :|.:.:      ||...|..||.....|....|.:           
  Rat   282 EYNKAIRNYTHFDDWYLWVQMYKGT------VSMPVFQSLEAYWPGLQSLIGDI----------- 329

  Fly   517 YTDKYMEVGKGITNTCHESYIRAPTQLG--PEAFRFSE--AVEARALRSQEKYYILRPETFESYF 577
              |..|..        ..:|.....|.|  ||.:...:  .||.|      :.|.||||..||..
  Rat   330 --DNAMRT--------FLNYYTVWKQFGGLPEFYNIPQGYTVEKR------EGYPLRPELIESAM 378

  Fly   578 VLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLF 642
            .|:|.|.|....:.|.:||.::||..:...|:..::::  ::.:.|:..:|||||||:|||||||
  Rat   379 YLYRATGDPTLLELGRDAVESIEKISKVECGFATIKDL--RDHKLDNRMESFFLAETVKYLYLLF 441

  Fly   643 -----------SDDSVL-PLDE-------WVFNTEAHPL 662
                       :.|||: |..|       ::|||||||:
  Rat   442 HPNNFIHNNGSTFDSVMTPHGECILGAGGYIFNTEAHPI 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 161/494 (33%)
Edem2NP_001004230.1 Glyco_hydro_47 42..480 CDD:460241 157/486 (32%)

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