DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ia and Man1a2

DIOPT Version :9

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001099922.1 Gene:Man1a2 / 295319 RGDID:1309767 Length:641 Species:Rattus norvegicus


Alignment Length:478 Identity:273/478 - (57%)
Similarity:359/478 - (75%) Gaps:10/478 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 MGIADHNPGGIQF-ERRAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVD 266
            :|::..:|...:. ::|..:|:||:|||.||:.|.||.|||||::::.||.:||||..:||||||
  Rat   165 VGVSGGDPEDAEIRKKRDKIKEMMKHAWDNYRTYGWGHNELRPIARKGHSTNIFGSSQMGATIVD 229

  Fly   267 GLDTLYIMGLEKEYREGRDWIERKFSLD-NISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQ 330
            .|||||||||..|:.:|:.|||.  :|| ::::|:||||.||||:||:|..|..:|:.::|.||.
  Rat   230 ALDTLYIMGLHDEFMDGQRWIED--NLDFSVNSEVSVFEVNIRFIGGLLAAYYLSGEEIFKTKAV 292

  Fly   331 HVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRE 395
            .:|:||||||.||||||:|:||.|:||.:|:||||.|||||:||||||:||.:||.:||:..|..
  Rat   293 QLAEKLLPAFNTPTGIPWAMVNLKSGVGRNWGWASAGSSILAEFGTLHMEFVHLSYLTGDLTYYN 357

  Fly   396 RVQTIRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREM 460
            :|..||::|:::|:|.|||||:|||:||:|||.|.|:|.||||:|||||||||.|.:||.|||.|
  Rat   358 KVMHIRKLLQKMERPNGLYPNYLNPRTGRWGQYHTSVGGLGDSFYEYLLKAWLMSDKTDHEARRM 422

  Fly   461 FDEAMLAILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDYTDKYMEVG 525
            :|:|:.||...:::.|.|||.::.:.|...||.||.|||||:||:|||||...:.|....|:|:|
  Rat   423 YDDAVEAIEKHLIKKSRGGLVFIGEWKNGHLERKMGHLACFAGGMFALGADGSRKDKAGHYLELG 487

  Fly   526 KGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYILRPETFESYFVLWRLTHDQKYRD 590
            ..|..||||||.|...:||||:|:|..||||.|:|..|||||||||..|:|:.|||.|||.:||.
  Rat   488 AEIARTCHESYDRTALKLGPESFKFDGAVEAVAVRQAEKYYILRPEVIETYWYLWRFTHDPRYRQ 552

  Fly   591 WGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVF 655
            |||||.||:||.||.:.|:.|:::||...|..|||||||||||||||||||||.|.:||||.|||
  Rat   553 WGWEAALAIEKSCRVSGGFSGVKDVYSPTPAHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVF 617

  Fly   656 NTEAHPLPIKGANAYYRQAPVTL 678
            ||||||||:      .|.|..||
  Rat   618 NTEAHPLPV------LRLANTTL 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 Glyco_hydro_47 224..664 CDD:279825 264/440 (60%)
Man1a2NP_001099922.1 ATP-synt_B <107..151 CDD:304375
Glyco_hydro_47 187..626 CDD:279825 264/440 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343603
Domainoid 1 1.000 565 1.000 Domainoid score I222
eggNOG 1 0.900 - - E1_KOG2204
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55982
Inparanoid 1 1.050 593 1.000 Inparanoid score I937
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 1 1.000 - - FOG0001280
OrthoInspector 1 1.000 - - otm45570
orthoMCL 1 0.900 - - OOG6_100239
Panther 1 1.100 - - LDO PTHR11742
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X635
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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