DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and Edem3

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_038946376.1 Gene:Edem3 / 289085 RGDID:1561496 Length:949 Species:Rattus norvegicus


Alignment Length:486 Identity:156/486 - (32%)
Similarity:232/486 - (47%) Gaps:85/486 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 VKQMMEHAWHNYKLYAWGKNELRPLS-------QRPHSASI---FGSYDLGATIVDGLDTLYIMG 275
            |.:|.:||:.||..:|:..:||.||:       |.|....:   .|.:.|  |::|.||||.::.
  Rat    57 VLEMFDHAYGNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSL--TLIDSLDTLVVLN 119

  Fly   276 LEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEK------------ 328
            ..||:.:....:.|..:||| ...:||||||||.:||:|..::..  .:.|||            
  Rat   120 KTKEFEDAVRKVLRDVNLDN-DVVVSVFETNIRVLGGLLGGHSLA--IMLKEKGEYMQWYNDELL 181

  Fly   329 --AQHVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGS---SILSEFGTLHLEFAYLSDIT 388
              |:.:..||||||.|.:|:||..:|.|.|:.|..  |..|:   :..:..|||.||||.||..|
  Rat   182 QMAKQLGYKLLPAFNTTSGLPYPRINLKFGIRKPE--ARTGTETDTCTACAGTLILEFAALSRFT 244

  Fly   389 GNPLYRERVQTIRQVL-KEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQ 452
            |..::.|..:.....| ::.::...|....:|..||.|.:....:||..||||||||||::..| 
  Rat   245 GATVFEEYARKALDFLWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYLLKAYVLLG- 308

  Fly   453 TDEEAREMFDEAMLAILDKMVRTSPGGLTYVSD--LKFDRLEHK--------MDHLACFSGGLFA 507
             |:...|.|:....||           :.|:|.  |..|...||        ||.|..|..||..
  Rat   309 -DDSFLERFNTHYDAI-----------MRYISQPPLLLDVHIHKPMLNARTWMDALLAFFPGLQV 361

  Fly   508 LGAATRQNDYTDK--YMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYILRP 570
            |....|....|.:  |..:.|       .:::       ||||    ..:.|...:|   :.|||
  Rat   362 LKGDIRPAIETHEMLYQVIKK-------HNFL-------PEAF----TTDFRVHWAQ---HPLRP 405

  Fly   571 ETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETL 635
            |..||.:.|::.|.|..|.:.|...:..|.|:.|...|:..:::|  :....:|...||||||..
  Rat   406 EFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAMKDV--RTGSHEDRMDSFFLAEMF 468

  Fly   636 KYLYLLFSD--DSVLPLDEWVFNTEAHPLPI 664
            |||||||:|  |.:..:::::|.||||.||:
  Rat   469 KYLYLLFADKEDIIFDIEDYIFTTEAHLLPL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 155/484 (32%)
Edem3XP_038946376.1 Glyco_hydro_47 60..499 CDD:460241 154/481 (32%)
PA_EDEM3_like 666..791 CDD:239041
Blue background indicates that the domain is not in the aligned region.

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