DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ia and mans-3

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_508877.1 Gene:mans-3 / 180787 WormBaseID:WBGene00020197 Length:584 Species:Caenorhabditis elegans


Alignment Length:537 Identity:195/537 - (36%)
Similarity:286/537 - (53%) Gaps:54/537 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 LTAATTSSAKS----LENSQ---------GSDTPHSHANTTN-----ADITMGI------ADHNP 210
            :|..:...||.    :||.:         |..|.||...:..     .||...|      |....
 Worm    57 ITICSQGEAKREQPIVENPEIIINEQVIAGQKTKHSKEESAENLKPVHDIDRQIVEDEMDAPETG 121

  Fly   211 GG----IQF-----ERRAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVD 266
            ||    ::|     :|:..|.:..:|||..||.||||.:.|:|:|:     |....:|.|.||||
 Worm   122 GGNEKIVKFTGPTNDRQKAVVKAFQHAWIGYKKYAWGHDTLKPVSK-----SYSDWFDTGLTIVD 181

  Fly   267 GLDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQH 331
            ||||..|||||.|..|..:||:...:.:. ...::.||..||.:|||::.:..||..::.||:..
 Worm   182 GLDTAIIMGLEDEATEATEWIQNTLTFEK-DRMVNFFECTIRVLGGMMSAFHLTGKKMFLEKSVD 245

  Fly   332 VADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRER 396
            :.|:||.||::|:.|||:.||.....|.|..|  |..|.|||..|:.||:..||..:||..|.:.
 Worm   246 LGDRLLSAFKSPSPIPYSDVNLLKRTATNPQW--GADSSLSEVTTVQLEYRALSRASGNSTYEDL 308

  Fly   397 VQTIRQVLKEI--EKPKGLYPNFLNPKTGKWGQ-LHMSLGALGDSYYEYLLKAWLQSGQTDEEAR 458
            ...:.:.:.:|  |..:||...|:|..||.:.: ..::.||..||:||||.|.|:|:|:|.:..:
 Worm   309 TFNVFKHIHKIGCETHEGLCGMFINANTGNFKKDSTITFGARSDSFYEYLFKQWIQTGKTIDWLK 373

  Fly   459 EMFDEAMLAILDKMVRTS-PGGLTYVSD-LKFDRLEHKMDHLACFSGGLFALGAATRQNDYTDKY 521
            |.:.:||.|:...:.|.| |..:.::.: |.......|||||.||..|..:.|:   |:.:..|:
 Worm   374 EDYGKAMKAMEKYLYRNSKPNKMFFIGELLSGQTYSPKMDHLVCFIAGTLSQGS---QHGFPRKH 435

  Fly   522 MEVGKGITNTCHESYIRAPTQLGPEAFRFS--EAVEARALRSQEKYYILRPETFESYFVLWRLTH 584
            :::.:.|..|||..|.. ||.||||...|:  ...|...::..:.:.:||||..|::|.|:|.|.
 Worm   436 LDMAEKIGETCHNMYDN-PTGLGPEIAHFNMIPGKEDLYVKPLDAHCLLRPEAIEAWFYLYRFTG 499

  Fly   585 DQKYRDWGWEAVLALEKHCR-TAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDD-SV 647
            |:||::|||.|..|:||:.| ...||..:.||.|...:..|..:||.|.||.||||||..|| :|
 Worm   500 DKKYQEWGWSAFQAIEKYARIPTGGYSSISNVKQINVRFRDSMESFLLGETFKYLYLLLGDDQTV 564

  Fly   648 LPLDEWVFNTEAHPLPI 664
            ||||:|||.||.|||||
 Worm   565 LPLDKWVFTTEGHPLPI 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 177/456 (39%)
mans-3NP_508877.1 Glyco_hydro_47 144..581 CDD:460241 175/448 (39%)

Return to query results.
Submit another query.