DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and C47E12.3

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_501802.2 Gene:C47E12.3 / 177857 WormBaseID:WBGene00008148 Length:568 Species:Caenorhabditis elegans


Alignment Length:545 Identity:152/545 - (27%)
Similarity:252/545 - (46%) Gaps:108/545 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 ATTSSAKSLENSQGSDTPH-------SHANTTNADITMGIADHNPGGIQFERRAHVKQMMEHAWH 230
            :||.|.|:.:|      |.       .:|:.::.|:..|:             |..::|.:..|.
 Worm    15 STTCSLKTTKN------PFLLTKEEIKYASISDVDLQYGL-------------AKTREMFQFGWD 60

  Fly   231 NYKLYAWGKNELRPLSQR--------PHSAS---IFGSYDLGATIVDGLDTLYIMGLEKEYREGR 284
            ||..:|:..:||.|:..|        |.:.:   :.|.|.||  ::|.||:|.:.|...|::...
 Worm    61 NYMEHAFPADELDPIHCRGRGHDHDNPDNINVNDVLGDYSLG--LIDTLDSLVVFGDADEFKRAV 123

  Fly   285 DWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGD------PLYKEK--------AQHVADK 335
            :.:.:..|.:. :..:.|||:.||.:||:|..:....|      |.|...        |..:|.:
 Worm   124 NLVIKTVSFEK-NTTVQVFESTIRVMGGLLAAHMIAADKTNRFGPFYMSDYGGELLTLAHDLAGR 187

  Fly   336 LLPAFQ-TPTGIPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRERVQT 399
            |||||. |.|||||..:|.:.|:..    .:..|:..|..|:|.|||..||.:.|:..|....:.
 Worm   188 LLPAFDGTATGIPYTRINLQKGILP----GTTNSTCTSGAGSLLLEFGVLSKLLGDDTYERLARR 248

  Fly   400 IRQVLKEI-EKPKGLYPNFLNPKTGKW-GQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMFD 462
            :.:.|..: .:..||:.|.::.:||:| |.| ..|||..||:|||:||:::..|  ::...:|::
 Worm   249 VNEKLWNLRNEVTGLHGNLIDIQTGEWLGHL-AGLGAGIDSFYEYMLKSYILFG--NQRDLDMYN 310

  Fly   463 EAMLAILDKMVRTSPGGLTYVSDLKFD-----RLEHK--------MDHL-ACFSGGLFALGAATR 513
            |:...|...|.|    |.:..|.|:.|     .::.:        :|.| |.|:|.|...|    
 Worm   311 ESFARITTYMRR----GRSRCSSLEGDIPIYVNVDSRDGSTSNTWIDSLQASFAGVLVLAG---- 367

  Fly   514 QNDYTDKYMEVGKGITNTCHES-YIRAPTQLGPEAFRFSEAVEARALRSQEKYYILRPETFESYF 577
                     ||.:.:   ||.: |.....:.|....||:..::|    ....:|.||||..||.:
 Worm   368 ---------EVDEAV---CHHALYYAIWKKYGVLPERFNWQLQA----PDVSFYPLRPEFVESTY 416

  Fly   578 VLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLF 642
            :|:..|.:..|:..|.|.:.:||...|...|:..:.:|.  :...:|..:||||:||||||||||
 Worm   417 LLYTATKNPFYQHVGLEILDSLETITRVKCGFATVHDVI--DGSLEDRMESFFLSETLKYLYLLF 479

  Fly   643 SDDSVLPLDEW---VFNTEAHPLPI 664
            ..|..:..::.   :|:||.|..||
 Worm   480 DVDHPINKEQQESVLFSTEGHIFPI 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 141/493 (29%)
C47E12.3NP_501802.2 Glyco_hydro_47 54..504 CDD:460241 140/485 (29%)

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