DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and man1c1

DIOPT Version :9

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_031752782.1 Gene:man1c1 / 100485889 XenbaseID:XB-GENE-6076350 Length:617 Species:Xenopus tropicalis


Alignment Length:463 Identity:256/463 - (55%)
Similarity:338/463 - (73%) Gaps:4/463 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 MGIADHNPGGIQF-ERRAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVD 266
            || :.|.|..|.. |:|..||:||..||::||.||||:||||||::..|..|:||... ||||||
 Frog   152 MG-SKHEPKDIDMQEKRKKVKEMMIFAWNSYKQYAWGENELRPLTKDGHFGSLFGGLK-GATIVD 214

  Fly   267 GLDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQH 331
            .||||:|||:::|:.|.:.|||....| |::.|.|:||.|||::||:|:.|..:|..::::||..
 Frog   215 ALDTLFIMGMKEEFEEAQKWIETSLDL-NVNGEASLFEVNIRYIGGLLSAYFLSGKEVFRDKAIG 278

  Fly   332 VADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRER 396
            :.:||||||.||||||..::|...|:..::||||.|||||:|||||||||..||:::||.::.|:
 Frog   279 LGNKLLPAFSTPTGIPRGIINLGNGLTWSWGWASAGSSILAEFGTLHLEFVQLSELSGNTIFTEK 343

  Fly   397 VQTIRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMF 461
            |..||::|.:||||.|||||:.:|.:|.|.|.|:|||.||||:||||:|:||.|.:.|.||:.|:
 Frog   344 VNGIRKLLSKIEKPHGLYPNYFSPISGNWVQHHVSLGGLGDSFYEYLIKSWLMSARQDNEAKSMY 408

  Fly   462 DEAMLAILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDYTDKYMEVGK 526
            .:|:.||...::|.|||||||:::.:...|:|||.||.||:.|:|||||........|.|||:..
 Frog   409 YDALEAIETHLIRKSPGGLTYIAEWRGGILDHKMGHLTCFAAGMFALGARDAPAQKRDHYMELAA 473

  Fly   527 GITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYILRPETFESYFVLWRLTHDQKYRDW 591
            .|.|||||||.|..|:||||.|||....||.|.|..|:||:||||..|||..||||||:.|||:|
 Frog   474 EIANTCHESYARTDTKLGPEVFRFDFGAEATASRLSERYYMLRPEVAESYVYLWRLTHNPKYREW 538

  Fly   592 GWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFN 656
            |||.|.||||:||...|:.|:|:||...|..|:||||||::|||||||||||:|.:|.|::||||
 Frog   539 GWEIVQALEKYCRIESGFSGIRDVYSTSPNHDNVQQSFFMSETLKYLYLLFSEDDLLSLEDWVFN 603

  Fly   657 TEAHPLPI 664
            ||||||||
 Frog   604 TEAHPLPI 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 Glyco_hydro_47 224..664 CDD:279825 245/439 (56%)
man1c1XP_031752782.1 Glyco_hydro_47 173..611 CDD:396217 245/439 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 572 1.000 Domainoid score I226
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 587 1.000 Inparanoid score I981
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 1 1.000 - - FOG0001280
OrthoInspector 1 1.000 - - otm48662
Panther 1 1.100 - - O PTHR11742
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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