DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and edem3

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_017949129.2 Gene:edem3 / 100145667 XenbaseID:XB-GENE-5811499 Length:918 Species:Xenopus tropicalis


Alignment Length:492 Identity:153/492 - (31%)
Similarity:233/492 - (47%) Gaps:81/492 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RAHVKQMMEHAWHNYKLYAWGKNELRPLS-------QRPHSASI---FGSYDLGATIVDGLDTLY 272
            |:.|.:|.:||:.:|..:|:..:||.||:       |.|....:   .|.:.|  |::|.||||.
 Frog    39 RSQVLEMFDHAYGSYMQHAYPADELMPLTCRGRIRGQEPSRGDVDDALGKFSL--TLIDTLDTLV 101

  Fly   273 IMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAF------TGDPL--YKEKA 329
            ::....|:.:....:....:||| ...:||||||||.:||:|..::.      ..|.:  |.::.
 Frog   102 VLNKTNEFEDAVRKVITDVNLDN-DIVVSVFETNIRVLGGLLGGHSLAIMLKENSDRMQWYNDEL 165

  Fly   330 QHVAD----KLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGS---SILSEFGTLHLEFAYLSDI 387
            .|:|.    ||||||.|.:|:||..:|.|.|:....  |..|:   :..:..||:.||||.||..
 Frog   166 LHMAKELGYKLLPAFNTTSGLPYPRINLKFGIRSPE--ARTGTETDTCTACAGTMILEFAALSRF 228

  Fly   388 TGNPLYRERVQTIRQVL-KEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSG 451
            ||..::.|..:.....| ::.::...|....:|..||.|.:....:||..||||||||||::..|
 Frog   229 TGIAVFEEHARKALDFLWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYLLKAYVLLG 293

  Fly   452 QTDEEAREMFDEAMLAILDKMVRTSPGGLTYVSD--LKFDRLEHK--------MDHLACFSGGLF 506
              |:...|.|:....||           :.|:|.  |..|...||        ||.|..|..||.
 Frog   294 --DDSYLERFNTHYDAI-----------MRYISQPPLLLDVHIHKPMLTARTWMDSLLAFFPGLQ 345

  Fly   507 ALGAATRQNDYTDK--YMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYILR 569
            .|....|....|.:  |..:.|       .:::       ||||    ..:.|...:|   :.||
 Frog   346 VLKGDIRPAIETHEMLYQVIKK-------HNFL-------PEAF----TTDFRVHWAQ---HPLR 389

  Fly   570 PETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAET 634
            ||..||.:.|::.|.|..|.:.|...:..|.|:.|...|:..:::|  :....:|...||||||.
 Frog   390 PEFAESTYFLYKATGDPYYLEVGRTLIDNLNKYARVPCGFAAVKDV--RTGSHEDRMDSFFLAEM 452

  Fly   635 LKYLYLLFS--DDSVLPLDEWVFNTEAHPLPIKGANA 669
            .||||||||  :|.:..::.::|.||||.||:..:.|
 Frog   453 FKYLYLLFSEREDLIFDIESYIFTTEAHLLPLSLSTA 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 151/485 (31%)
edem3XP_017949129.2 Glyco_hydro_47 45..484 CDD:460241 149/479 (31%)
PA_EDEM3_like 650..776 CDD:239041
Blue background indicates that the domain is not in the aligned region.

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