DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hk and kcnab2a

DIOPT Version :9

Sequence 1:NP_001259401.1 Gene:Hk / 31955 FlyBaseID:FBgn0263220 Length:887 Species:Drosophila melanogaster
Sequence 2:XP_021335580.1 Gene:kcnab2a / 797337 ZFINID:ZDB-GENE-140515-2 Length:430 Species:Danio rerio


Alignment Length:431 Identity:183/431 - (42%)
Similarity:273/431 - (63%) Gaps:47/431 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 GAMGVIPSTNDSNNNN-----------------NNNNNVDNTSDESNPVTIYRCRAP--IASLDC 175
            ||.||..|::.|:...                 :::..::....:::...:.|.|..  .|.:..
Zfish    14 GASGVRKSSSSSSGGKMLSMSYSESIRSGISRYHSDQGLNQPPRQTDQAELQRLREQRVAAQIKN 78

  Fly   176 MEEFSRSISLGSNPALPLRHGSTPTPGLRYKNLGKSGLRISNVGLGTWPVFSPGVSDDQAEAILK 240
            ||:|.:...|.....:..:      .|::|:||||||||:|.:|||||..|...::|:.||.::.
Zfish    79 MEDFLKMNGLALEECVSYQ------TGMKYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMT 137

  Fly   241 LAIESGINLFDISEAH----SETEIGKILQRAGWKRTAYVITTKVYWSTKSE-ERGLSRKHIIEC 300
            ||.|:||||||.:|.:    :|..:|.::::.||:|::.|||||::|..|:| |||||||||||.
Zfish   138 LAYENGINLFDTAEVYAAGKAEVVLGNVIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEG 202

  Fly   301 VRASLQRLQLQYIDIVIIHKADPMCPM-EVVRAMSYVIQQGWAMYWGTARWSQVEIMEAYTNCRQ 364
            ::|||:||||:|:|:|..::.||..|| |.||||::||.||.||||||:|||.:||||||:..||
Zfish   203 LKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSPMEIMEAYSVARQ 267

  Fly   365 FNCITPIVEQSEYHMFCREKCELYLPEMYNKIGVGLMAWGPLSMALSDTQNGDKLFLPKGSFKTK 429
            ||.|.||.||||||||.|||.|:.|||:::|||||.|.|.||:..:...:. |....|......|
Zfish   268 FNQIPPICEQSEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIISGKY-DSGVPPYSRASLK 331

  Fly   430 SFSWTEDEINRNAALSPQGSWGKDRIDEGRRHCDRLRDLAALAEKLGCSPTQLSIAWSLKHEPVQ 494
            .:.|.:|:|     ||          :||||...:|::|.|:||:|||:..||:|||.|::|.|.
Zfish   332 GYQWLKDKI-----LS----------EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVS 381

  Fly   495 CLLLGATSAEQLHQSLQSLQLLPRLSSSVMLELERILENKP 535
            .:||||::.:||.:::.::|:||:||||::.|::.||.|||
Zfish   382 SVLLGASNTDQLMENIGAIQVLPKLSSSIVHEVDSILGNKP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HkNP_001259401.1 Kv_beta 205..531 CDD:213602 164/331 (50%)
Aldo_ket_red 218..531 CDD:278668 154/318 (48%)
kcnab2aXP_021335580.1 Kv_beta 102..418 CDD:213602 164/331 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 300 1.000 Domainoid score I1392
eggNOG 1 0.900 - - E1_COG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000530
OrthoInspector 1 1.000 - - otm25505
orthoMCL 1 0.900 - - OOG6_100387
Panther 1 1.100 - - O PTHR43150
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R634
SonicParanoid 1 1.000 - - X715
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.800

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