DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hk and kcnab2b

DIOPT Version :9

Sequence 1:NP_001259401.1 Gene:Hk / 31955 FlyBaseID:FBgn0263220 Length:887 Species:Drosophila melanogaster
Sequence 2:XP_005162233.1 Gene:kcnab2b / 565014 ZFINID:ZDB-GENE-080219-36 Length:469 Species:Danio rerio


Alignment Length:429 Identity:188/429 - (43%)
Similarity:265/429 - (61%) Gaps:69/429 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 GNGAMGVIPSTNDSNNNNNNNNNVDNTSDESNPVTIYRCRAPIASLDCMEEFSRSISLGSNPALP 192
            |.|.||.|.|..:                         .|| .|.|..:|:|.||..:....::.
Zfish    81 GGGEMGEIRSLRE-------------------------VRA-AAQLKNLEDFLRSNGVSLQESIS 119

  Fly   193 LRHGSTPTPGLRYKNLGKSGLRISNVGLGTWPVFSPGVSDDQAEAILKLAIESGINLFDISEAH- 256
            .:      .|:||:||||||||:|.:|||||..|...::|:.||.::.||.|:||||||.:|.: 
Zfish   120 FQ------TGMRYRNLGKSGLRVSCLGLGTWVTFGGQITDEIAEQLMTLAYENGINLFDTAEVYA 178

  Fly   257 ---SETEIGKILQRAGWKRTAYVITTKVYWSTKSE-ERGLSRKHIIECVRASLQRLQLQYIDIVI 317
               :|..:|.|:::.||:|::.|||||:||..|:| |||||||||||.:||||:||||:|:|:|.
Zfish   179 AGKAEMVLGSIIKKKGWRRSSLVITTKIYWGGKAETERGLSRKHIIEGLRASLERLQLEYVDVVF 243

  Fly   318 IHKADPMCPM----------------EVVRAMSYVIQQGWAMYWGTARWSQVEIMEAYTNCRQFN 366
            .::.||..||                |.||||::||.||.||||||:|||.:||||||:..||||
Zfish   244 ANRPDPNTPMEGDPFNTSKSRTFIIEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFN 308

  Fly   367 CITPIVEQSEYHMFCREKCELYLPEMYNKIGVGLMAWGPLSMALSDTQNGDKLFLPKGSFKTKSF 431
            .|.|:.||:|||||.|||.|:.|||:::|||||.|.|.||:..:...:. |....|......|.:
Zfish   309 LIPPVCEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIISGKY-DSGVPPCSRASLKGY 372

  Fly   432 SWTEDEINRNAALSPQGSWGKDRIDEGRRHCDRLRDLAALAEKLGCSPTQLSIAWSLKHEPVQCL 496
            .|.:|:|     ||          :||||...:|::|.|:||:|||:..||:|||.|::|.|.|:
Zfish   373 QWMKDKI-----LS----------EEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSCV 422

  Fly   497 LLGATSAEQLHQSLQSLQLLPRLSSSVMLELERILENKP 535
            ||||:|.:||.:::.::|:||:||||::.|::.||.|||
Zfish   423 LLGASSTDQLMENIGAIQVLPKLSSSIIHEVDSILGNKP 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HkNP_001259401.1 Kv_beta 205..531 CDD:213602 167/346 (48%)
Aldo_ket_red 218..531 CDD:278668 157/333 (47%)
kcnab2bXP_005162233.1 Kv_beta 126..457 CDD:213602 167/346 (48%)
Aldo_ket_red 126..456 CDD:119408 167/345 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 300 1.000 Domainoid score I1392
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000530
OrthoInspector 1 1.000 - - otm25505
orthoMCL 1 0.900 - - OOG6_100387
Panther 1 1.100 - - O PTHR43150
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R634
SonicParanoid 1 1.000 - - X715
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.940

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