DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hk and kcnab1a

DIOPT Version :9

Sequence 1:NP_001259401.1 Gene:Hk / 31955 FlyBaseID:FBgn0263220 Length:887 Species:Drosophila melanogaster
Sequence 2:XP_021323321.1 Gene:kcnab1a / 541540 ZFINID:ZDB-GENE-050327-79 Length:423 Species:Danio rerio


Alignment Length:354 Identity:159/354 - (44%)
Similarity:234/354 - (66%) Gaps:36/354 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 GLRYKNLGKSGLRISNVGLGTWPVFSPGVSDDQAEAILKLAIESGINLFDISEAH----SETEIG 262
            |:.|:||||||||:|.:|||||..|...:|||.||.::.:|.|||:||||.:|.:    :|..:|
Zfish    87 GMPYRNLGKSGLRVSCLGLGTWVTFGGQISDDVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILG 151

  Fly   263 KILQRAGWKRTAYVITTKVYWSTKSE-ERGLSRKHIIECVRASLQRLQLQYIDIVIIHKADPMCP 326
            .|:::.||:|::.|||||:||..|:| |||||||||||.::.||||:|::|:|:|..::.|...|
Zfish   152 NIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRMQMEYVDVVFANRPDSNTP 216

  Fly   327 M-EVVRAMSYVIQQGWAMYWGTARWSQVEIMEAYTNCRQFNCITPIVEQSEYHMFCREKCELYLP 390
            | |:||||:|||.||.:|||||:||:.:||||||:..||||.|.|:.||:|||:|.|||.|:.||
Zfish   217 MEEIVRAMTYVINQGMSMYWGTSRWTAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVEVQLP 281

  Fly   391 EMYNKIGVGLMAWGPLSMAL--SDTQNGDKLFLPKGS-FKTKSFSWTEDEINRNAALSPQGSWGK 452
            |:|:|||||.|.|.||:..:  ...:||    :|..| ...||:.|.:::|..            
Zfish   282 ELYHKIGVGAMTWSPLACGIITGKYENG----IPDSSRASMKSYQWLKEKIVS------------ 330

  Fly   453 DRIDEGRRHCDRLRDLAALAEKLGCSPTQLSIAWSLKHEPVQCLLLGATSAEQLHQSLQSLQ--- 514
               ::||:...:|::|..:||||||:..||::||.|::|.|..:|||.::||||.::|.::|   
Zfish   331 ---EDGRKQQAKLKELGHIAEKLGCTLPQLAVAWCLRNEGVSSVLLGTSNAEQLTENLGAIQVSK 392

  Fly   515 -----LLPRLSSSVMLELERILENKPVRP 538
                 ::.|......:||...:|....:|
Zfish   393 SFCHVIVARDLEGKKIELSSFMEGNLSKP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HkNP_001259401.1 Kv_beta 205..531 CDD:213602 156/342 (46%)
Aldo_ket_red 218..531 CDD:278668 146/329 (44%)
kcnab1aXP_021323321.1 Kv_beta 90..390 CDD:213602 152/318 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 300 1.000 Domainoid score I1392
eggNOG 1 0.900 - - E1_COG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56491
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000530
OrthoInspector 1 1.000 - - otm25505
orthoMCL 1 0.900 - - OOG6_100387
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X715
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.760

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