DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hk and Kcnab1

DIOPT Version :9

Sequence 1:NP_001259401.1 Gene:Hk / 31955 FlyBaseID:FBgn0263220 Length:887 Species:Drosophila melanogaster
Sequence 2:NP_001344287.1 Gene:Kcnab1 / 16497 MGIID:109155 Length:419 Species:Mus musculus


Alignment Length:428 Identity:181/428 - (42%)
Similarity:270/428 - (63%) Gaps:32/428 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 TGPTTQQLMIGNGAMGVIPSTNDSNNNNNNNNNVDNTSDES-NPVTIYRCRAPIASLDCMEEFSR 181
            ||....|:...|.........:....:.:.....:|..|.| :|....:.||...:|....|.:.
Mouse     6 TGAAGSQISEDNSKFRKQSGLSSGGKDRSPKKAPENAKDSSLSPTGQSQLRARQLALLREVEMNW 70

  Fly   182 SISLGSNPALPLRHGSTPTPGLRYKNLGKSGLRISNVGLGTWPVFSPGVSDDQAEAILKLAIESG 246
            .:.|..   |...|.:..|.|:.::||||||||:|.:|||||..|...:||:.||.::.:|.|||
Mouse    71 YLKLCE---LSSEHTTAHTTGMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESG 132

  Fly   247 INLFDISEAH----SETEIGKILQRAGWKRTAYVITTKVYWSTKSE-ERGLSRKHIIECVRASLQ 306
            :||||.:|.:    :|..:|.|:::.||:|::.|||||:||..|:| |||||||||||.::.|||
Mouse   133 VNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQ 197

  Fly   307 RLQLQYIDIVIIHKADPMCPM-EVVRAMSYVIQQGWAMYWGTARWSQVEIMEAYTNCRQFNCITP 370
            ||||:|:|:|..::.|...|| |:||||::||.||.||||||:|||.:||||||:..||||.|.|
Mouse   198 RLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPP 262

  Fly   371 IVEQSEYHMFCREKCELYLPEMYNKIGVGLMAWGPLSMALSDTQNGDKLFLPKGS-FKTKSFSWT 434
            :.||:|||:|.|||.|:.|||:|:|||||.|.|.||:..:...:.|:.  :|:.| ...|.:.|.
Mouse   263 VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNG--VPESSRASLKCYQWL 325

  Fly   435 EDEINRNAALSPQGSWGKDRI--DEGRRHCDRLRDLAALAEKLGCSPTQLSIAWSLKHEPVQCLL 497
                             |:||  :|||:..::|:||:.:||:|||:..||::||.|::|.|..:|
Mouse   326 -----------------KERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVL 373

  Fly   498 LGATSAEQLHQSLQSLQLLPRLSSSVMLELERILENKP 535
            ||:::.|||.::|.::|:||:::|.|:.|::.||.|||
Mouse   374 LGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HkNP_001259401.1 Kv_beta 205..531 CDD:213602 159/334 (48%)
Aldo_ket_red 218..531 CDD:278668 150/321 (47%)
Kcnab1NP_001344287.1 Kv_beta 91..407 CDD:213602 159/334 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 302 1.000 Domainoid score I1397
eggNOG 1 0.900 - - E1_COG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56491
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000530
OrthoInspector 1 1.000 - - otm44000
orthoMCL 1 0.900 - - OOG6_100387
Panther 1 1.100 - - O PTHR43150
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R634
SonicParanoid 1 1.000 - - X715
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.800

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