DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2962 and Pou2af1

DIOPT Version :10

Sequence 1:NP_572612.2 Gene:CG2962 / 31952 FlyBaseID:FBgn0030186 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001103069.1 Gene:Pou2af1 / 690528 RGDID:1594728 Length:256 Species:Rattus norvegicus


Alignment Length:184 Identity:47/184 - (25%)
Similarity:70/184 - (38%) Gaps:35/184 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 GYSSGGYSSGGATKVVRVIHEHSA--PAAGPAYAPIDVPAPVAA-------------------PV 246
            |::|.|  :.|....|.:.|:..|  ...||:...::|.||...                   |:
  Rat    37 GHTSVG--TAGPPAAVVLPHQPLATYSTVGPSCLDMEVSAPTVTEEGTLCAGWLSQPAPATLQPL 99

  Fly   247 ASYLPPQEIAAPAPVYAAPAPAPVYAAPAPAPVYSAPAPAPVYSAPAPAPVYSAPAPAPVYSAPA 311
            |.:.|..|..:...| :.|..|.:|..|. .|.|:...|:.|.:..:| |:.:...|... :.||
  Rat   100 APWTPYTEYVSHEAV-SCPYSADMYVQPV-CPSYTVVGPSSVLTYASP-PLITNVTPRST-ATPA 160

  Fly   312 PAPAYSAPA-PAPVYSAPAPAPVYAAPA-------PAPVLSVPHPAPAPVFAPE 357
            ..|....|. .||:...|.|.|:...|.       |||.||.|.....|:..||
  Rat   161 VGPQLEGPEHQAPLTYFPWPQPLSTLPTSSLQYQPPAPTLSGPQFVQLPISIPE 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2962NP_572612.2 DUF4766 57..189 CDD:435045
Pou2af1NP_001103069.1 PD-C2-AF1 7..255 CDD:430516 47/184 (26%)
Blue background indicates that the domain is not in the aligned region.

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