DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ypel and AT3G08990

DIOPT Version :10

Sequence 1:NP_572609.1 Gene:Ypel / 31949 FlyBaseID:FBgn0030183 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_187511.2 Gene:AT3G08990 / 820051 AraportID:AT3G08990 Length:128 Species:Arabidopsis thaliana


Alignment Length:88 Identity:51/88 - (57%)
Similarity:66/88 - (75%) Gaps:0/88 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVVNVACGQTEERVLLTGLHAVADIYCECCKTP 80
            |||.:|:.|.|..:::|||||....|.||||::||||..|:.|.||::||.|.||||:|..|.:.
plant    14 YSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSL 78

  Fly    81 LGWKYEHAYESSQKYKEGKFIIE 103
            :|||||.||:.||||||||||:|
plant    79 VGWKYEIAYDKSQKYKEGKFILE 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YpelNP_572609.1 RLR_C_like 15..105 CDD:472430 51/88 (58%)
AT3G08990NP_187511.2 RLR_C_like 12..101 CDD:472430 50/86 (58%)

Return to query results.
Submit another query.