DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43902 and npm2b

DIOPT Version :10

Sequence 1:NP_572608.2 Gene:CG43902 / 31948 FlyBaseID:FBgn0264503 Length:1220 Species:Drosophila melanogaster
Sequence 2:NP_001116479.2 Gene:npm2b / 555786 ZFINID:ZDB-GENE-070410-125 Length:182 Species:Danio rerio


Alignment Length:183 Identity:39/183 - (21%)
Similarity:63/183 - (34%) Gaps:56/183 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 ESQRPTSRNFSVYLDAKKYQNSNNKKRSKEQKKNNISH----------HNYK-------LKNNKE 205
            ::::|.|..:...|      |.:||:.|.:....|..|          |..|       |...:.
Zfish     3 KTEKPLSTLWGCEL------NESNKEESFKTDDTNHQHQLALRTMCLGHTAKDEFNIVELVTGEG 61

  Fly   206 NNHHRLAKEAAAGKSEIETV----------------LGGGTKFT----------SGDEQPQLEDR 244
            |::.:....|......:.||                .|.|..|.          |.:|:...|..
Zfish    62 NSNAKAVPIATLHAKSMPTVNLSGLDLHPPVTFRLKHGSGPVFVGAEHVALEEYSDEEELDEEMD 126

  Fly   245 EQVEHEENANFGRQSFAYKKLKNMHEQQSQQDKKRGDDGDEVDLLDGEYPPSQ 297
            |:||.||...  .:|...|..||     |...:|:.:.|::.:..|||.||.:
Zfish   127 EEVEEEEEDI--EESPVKKVTKN-----SAGKRKKPEKGEDEEASDGENPPKK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43902NP_572608.2 None
npm2bNP_001116479.2 Nucleoplasmin 11..111 CDD:460792 17/105 (16%)

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