DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43902 and npm2

DIOPT Version :10

Sequence 1:NP_572608.2 Gene:CG43902 / 31948 FlyBaseID:FBgn0264503 Length:1220 Species:Drosophila melanogaster
Sequence 2:XP_012814520.1 Gene:npm2 / 549692 XenbaseID:XB-GENE-999546 Length:200 Species:Xenopus tropicalis


Alignment Length:227 Identity:43/227 - (18%)
Similarity:64/227 - (28%) Gaps:102/227 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 SNNKKRSK-----------EQKKNNISHHNYKLKNNKENNHHRLA-------------------- 212
            ||..|..|           ||.|.    ..:|:..:::...|:||                    
 Frog     6 SNTSKLEKPVSLIWGCELSEQNKT----FEFKISEDEDKCEHQLALRTVCLGDKAKDEFHVVEIV 66

  Fly   213 -KEAAAGKS-EIETV------------------------LGGGTKFTSGDEQPQLEDREQVEHEE 251
             ||..|.|. .|.|:                        .|.|..:.||......:|....|.| 
 Frog    67 TKEEGAEKPVPIATLKPSILPMATMVGIELTPPVTFRLKAGSGPVYISGQHVAMEDDYSWAEEE- 130

  Fly   252 NANFGRQSFAYKKLKNMHEQQSQQDKKRGDDG-DEVDLLDGEYPPSQLFDAIEILNERKFNKPSA 315
                                    |:..|::| :|.:..|.|.||            :...:|:|
 Frog   131 ------------------------DEGEGEEGEEEEEEEDPESPP------------KAVKRPAA 159

  Fly   316 QSTGKSRPQLQKKDKDKDQMKQEQVQEQEQHK 347
            .   |...|.:||..|||....|:....::.|
 Frog   160 T---KKAGQAKKKKLDKDDESSEEESPAKKGK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43902NP_572608.2 None
npm2XP_012814520.1 Nucleoplasmin 18..119 CDD:460792 17/104 (16%)

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