DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43902 and Npm3

DIOPT Version :10

Sequence 1:NP_572608.2 Gene:CG43902 / 31948 FlyBaseID:FBgn0264503 Length:1220 Species:Drosophila melanogaster
Sequence 2:NP_001388036.1 Gene:Npm3 / 502389 RGDID:1565542 Length:173 Species:Rattus norvegicus


Alignment Length:157 Identity:33/157 - (21%)
Similarity:61/157 - (38%) Gaps:32/157 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 RTPTPTIGRKLKRNFFGLS-QPETRYYGSYDIGRIRAQTQEDDT-----------TEEKKDE-NV 506
            |.|.|.   .:...|||.. ...||.: ::.:      .:||||           ||..||| ||
  Rat    27 RVPAPV---TMDSFFFGCELSSHTRSF-TFKV------EEEDDTEHVLALNMLCLTEGAKDECNV 81

  Fly   507 GEL----HYYDTSGGSSSRKLVSFDPEKSEENY-LSTYYPGKMNATEKKQQPTQQHATRYVDDDY 566
            .|:    |.........:...:|..|..|.::: |......::.:.....:.|.:|....:::|.
  Rat    82 VEVVARDHDNQEIAVPVANLRLSCQPMLSVDDFQLQPPVTFRLKSGSGPVRITGRHQIVCINNDL 146

  Fly   567 AEQQPPVEKSKLE----NPWEKSEEKP 589
            :|:.|...:.:::    .|.:|...:|
  Rat   147 SEESPDESEDEIKLCGILPAKKHRGRP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43902NP_572608.2 None
Npm3NP_001388036.1 Nucleoplasmin 38..139 CDD:460792 24/107 (22%)

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