DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43902 and Npm2

DIOPT Version :10

Sequence 1:NP_572608.2 Gene:CG43902 / 31948 FlyBaseID:FBgn0264503 Length:1220 Species:Drosophila melanogaster
Sequence 2:NP_976085.1 Gene:Npm2 / 290359 RGDID:727816 Length:207 Species:Rattus norvegicus


Alignment Length:203 Identity:37/203 - (18%)
Similarity:62/203 - (30%) Gaps:97/203 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 RPQLQKKD-------------KDKDQMKQEQVQEQEQHKS------------------------- 348
            |.|.::||             |.|:::.:.::..||..||                         
  Rat    33 RAQGERKDSCKLLLSTICLGEKAKEEVNRVEILPQEDRKSPITVATLKASVLPMVTVTGIELSPP 97

  Fly   349 --------------------RQVDEAIGDIEDNLDNDEILPTNNGEDEDDGDDADIDDDEDIKSA 393
                                ...|.|..|.|:..:.:|       ||||:.:|||:..:|     
  Rat    98 VTFRLRAGSGPVFLSGQECYETSDMAWEDDEEEEEEEE-------EDEDEDEDADLSLEE----- 150

  Fly   394 IDNDELAKKYPVATSTTTKVPTTLATSKTTSRSSSSSTTTTTMATSTTATSPSP--------STT 450
            |...::.:..|       :.||::|..|...:...:            |..|||        ..:
  Rat   151 IPIKQVKRAAP-------QRPTSIAKRKKVDKEEEA------------AVRPSPQDKSPWKKGKS 196

  Fly   451 TTKPRTPT 458
            |.||:..|
  Rat   197 TPKPKRST 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43902NP_572608.2 None
Npm2NP_976085.1 Nucleoplasmin 18..117 CDD:460792 10/83 (12%)

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