DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43902 and npm1a

DIOPT Version :10

Sequence 1:NP_572608.2 Gene:CG43902 / 31948 FlyBaseID:FBgn0264503 Length:1220 Species:Drosophila melanogaster
Sequence 2:NP_955460.2 Gene:npm1a / 266985 ZFINID:ZDB-GENE-021028-1 Length:279 Species:Danio rerio


Alignment Length:199 Identity:46/199 - (23%)
Similarity:69/199 - (34%) Gaps:59/199 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 GDEVDLLDGEYPPSQLFDAIEILNERKFNKPSAQSTGKSRPQLQKKDKDKDQMKQEQVQEQEQHK 347
            |..:.::.|:    |.||.    .|.:..:.....|.|.||.| ...|...:||.::        
Zfish   107 GQHLVIMGGD----QSFDE----EEEEEEEEETVMTSKKRPAL-STPKPSKKMKMDE-------- 154

  Fly   348 SRQVDEAIGDIEDNLDNDEILPTNNGEDEDDGDDADIDDDEDIKSAIDNDELAKKYPVATSTTT- 411
                       ||             :|:||.||.|.||||:.:|..::....||.|....|.| 
Zfish   155 -----------ED-------------DDDDDEDDDDEDDDEEDESEEESPVKEKKAPAKPKTPTQ 195

  Fly   412 --KVPTTLATSKTTSRSSSSSTTTTTMATSTTATSPSPSTTTTKPRTPTPTIGRKLKRNFFGLSQ 474
              |.|.....:|.|.:......|              |.|..| |||......:.::....|:|.
Zfish   196 NGKGPKPSTPAKQTPQKGKKEQT--------------PKTPQT-PRTLADIKSKMMESVAKGVSL 245

  Fly   475 PETR 478
            |:.:
Zfish   246 PKVQ 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43902NP_572608.2 None
npm1aNP_955460.2 Nucleoplasmin 12..111 CDD:460792 1/3 (33%)
NPM1-C 229..277 CDD:465081 3/21 (14%)

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