DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43902 and Npm1

DIOPT Version :10

Sequence 1:NP_572608.2 Gene:CG43902 / 31948 FlyBaseID:FBgn0264503 Length:1220 Species:Drosophila melanogaster
Sequence 2:NP_037124.1 Gene:Npm1 / 25498 RGDID:3192 Length:292 Species:Rattus norvegicus


Alignment Length:345 Identity:69/345 - (20%)
Similarity:106/345 - (30%) Gaps:128/345 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 DAADIILESQRPTSRNFSVYLDAKKYQNSNNKKRSKEQKKNNISHHNYKLKNNKENNHHRLAKEA 215
            |:.|:.:...||.:..|...|.|.|                     :|..|.:.:.|.|:|:   
  Rat     3 DSMDMDMSPLRPQNYLFGCELKADK---------------------DYHFKVDNDENEHQLS--- 43

  Fly   216 AAGKSEIETV-LGGGTKFTSGDEQPQLEDREQVEHEEN-------------------ANFGRQSF 260
                  :.|| ||.|.|     ::..:.:.|.:.:|.:                   ..|.....
  Rat    44 ------LRTVSLGAGAK-----DELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPP 97

  Fly   261 AYKKLK---------NMHEQQSQQDKKRGDDGDEVDLLDGEYPPSQLFDAIEILNERKFNKPSAQ 316
            ...:||         ..|....::|.: .:|.||.|              :::|.  ...|.||.
  Rat    98 VVLRLKCGSGPVHISGQHLVAVEEDAE-SEDEDEED--------------VKLLG--MSGKRSAP 145

  Fly   317 STGKSRPQLQKKDKDKDQMKQEQVQEQEQHKSRQVDEAIGDIEDNLDNDEILPTNNGEDEDDGDD 381
            ..|...||                      |..::||         |:||       :||||.||
  Rat   146 GGGNKVPQ----------------------KKVKLDE---------DDDE-------DDEDDEDD 172

  Fly   382 ADIDDDEDIKSAIDNDELAKKYPVATSTTTKVPTTLATSKTTSRSSSSSTTTTTMATSTTATSPS 446
            .|.|||:     .|.:|..:|.||..|...........|....:....||..:....|......:
  Rat   173 EDDDDDD-----FDEEETEEKVPVKKSVRDTPAKNAQKSNQNGKDLKPSTPRSKGQESFKKQEKT 232

  Fly   447 PSTTTTKPRTPTPTIGRKLK 466
            |.|    |:.|:.....|.|
  Rat   233 PKT----PKGPSSVEDIKAK 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43902NP_572608.2 None
Npm1NP_037124.1 Required for interaction with SENP3. /evidence=ECO:0000250 1..185 54/276 (20%)
Necessary for interaction with APEX1. /evidence=ECO:0000250 1..117 25/148 (17%)
Nucleoplasmin 18..117 CDD:460792 21/133 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 138..248 37/156 (24%)
Nuclear localization signal. /evidence=ECO:0000255 152..157 3/26 (12%)
Interaction with NOP2. /evidence=ECO:0000250|UniProtKB:P06748 186..214 5/27 (19%)
Nuclear localization signal. /evidence=ECO:0000255 190..196 3/5 (60%)
Required for nucleolar localization. /evidence=ECO:0000250 241..292 2/8 (25%)
NPM1-C 243..291 CDD:465081 2/6 (33%)

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