DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12645 and litaf

DIOPT Version :10

Sequence 1:NP_001096935.1 Gene:CG12645 / 31947 FlyBaseID:FBgn0030181 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_001002184.1 Gene:litaf / 431731 ZFINID:ZDB-GENE-040704-23 Length:163 Species:Danio rerio


Alignment Length:162 Identity:41/162 - (25%)
Similarity:59/162 - (36%) Gaps:44/162 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 MPMPM--PMSQTK----------DEVS---------------VQSEGLADNNSIDHRAMPPVRSK 109
            ||||.  ||..|.          ||:|               :::.|.....:.::..|.|..::
Zfish     3 MPMPTAPPMENTTLVGHPPPPSYDEISGANPYYPAGPYPPADMKASGPPPYPTQEYNQMYPPTAQ 67

  Fly   110 CDDFFILSP---------QPKL--GSQAMDIVCPACGQRGVTRLKRSPNARTNLWALC--LCTFG 161
            ...  :.||         ||.|  |:..:...||.|.|..:|||:.|....  :|..|  |..||
Zfish    68 GQP--VTSPVVAVQTVYVQPGLVFGNVPVQAHCPVCSQSVITRLEYSSGPL--VWLSCAGLAVFG 128

  Fly   162 WCCCACLFPYLWNGCRTTNHYCSACEIFLGAH 193
            .....||.|:.....:...|:|..|...||.|
Zfish   129 CIYGCCLIPFCIEDLKDVTHHCPNCSSVLGVH 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12645NP_001096935.1 zf-LITAF-like 129..193 CDD:463165 21/65 (32%)
litafNP_001002184.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/19 (37%)
PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 22..25 0/2 (0%)
zf-LITAF-like 93..161 CDD:463165 22/70 (31%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 116..136 6/21 (29%)

Return to query results.
Submit another query.