DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12645 and CG4250

DIOPT Version :10

Sequence 1:NP_001096935.1 Gene:CG12645 / 31947 FlyBaseID:FBgn0030181 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster


Alignment Length:151 Identity:40/151 - (26%)
Similarity:70/151 - (46%) Gaps:20/151 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 IQNNLDYSNDRRRTL-FAEPQHLRSRVEEMPMPMPMSQTKDEVSVQSEGLADNNSIDHRAMPPVR 107
            ::.|..|.|.:.:.. |..|....|..:::   .|.......|.:|.|...:..||.:.|.|.|.
  Fly     1 MEKNFQYENMQPQAPGFQAPPSYDSAPQQV---YPQLHQGQGVILQGENTENYESIGNNAPPNVL 62

  Fly   108 SKCDDFFILSPQPKLGSQAMDIVCPACGQRGVTRLKRSPNARTNLWALCLCTFGWCCCACLFPYL 172
            .:|         |.:.:      ||:||.|..|:::..|:.:|:|.||.:|..|..||.|: ||.
  Fly    63 GQC---------PSVAT------CPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCI-PYC 111

  Fly   173 WNGCRTTNHYCSACEIFLGAH 193
            .:.|::..|.|::|..::|.:
  Fly   112 TDSCQSAKHTCTSCGAYVGTY 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12645NP_001096935.1 zf-LITAF-like 129..193 CDD:463165 23/63 (37%)
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 24/74 (32%)

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