DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and RHO1

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_015491.1 Gene:RHO1 / 856294 SGDID:S000006369 Length:209 Species:Saccharomyces cerevisiae


Alignment Length:169 Identity:65/169 - (38%)
Similarity:101/169 - (59%) Gaps:5/169 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 KCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLRE 458
            |.|:|||||.|||.|::.:.:.:|...::||..:.|.|||.|:...|.|.:.|||||:..|.||.
Yeast    12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRP 76

  Fly   459 LCYPDSDVFLLCFSVVKPETFRAIKTKWAPK---FAKTKAALILVGTQADLRTSPNVLNKLQTNG 520
            |.||||:|.|:|||:..|::...::.||..:   |.: ...:||||.:.|||..|..:.:|:..|
Yeast    77 LSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQ-GVPIILVGCKVDLRNDPQTIEQLRQEG 140

  Fly   521 EEAISYADAWDLATTIGAK-YIETSSATQDKVKDVFDTA 558
            ::.::..:...:|..|||. |.|.|:.|...|::||:.|
Yeast   141 QQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAA 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 65/169 (38%)
RHO1NP_015491.1 RhoA_like 10..184 CDD:206662 65/169 (38%)

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