DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and RHO2

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_014309.3 Gene:RHO2 / 855634 SGDID:S000005034 Length:192 Species:Saccharomyces cerevisiae


Alignment Length:180 Identity:63/180 - (35%)
Similarity:99/180 - (55%) Gaps:13/180 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 KKAIAQPQPSIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDT 447
            :||:.:     |.|::||||.|||:|:..:...:|..::.||..:.|..|..|:...|.||:.||
Yeast     3 EKAVRR-----KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDT 62

  Fly   448 AGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPKFAK--TKAALILVGTQADLRTSP 510
            |||:..:.||...|..:|:.|:.|:|...|:....:||||.:..:  ..|.::|||.:.|||...
Yeast    63 AGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEA 127

  Fly   511 NVLNKLQTNG-EEAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTA 558
            :    .:.|. :|.:...||..:|..||| ||:|.|:.|.:.|.|||:.|
Yeast   128 H----FKENATDEMVPIEDAKQVARAIGAKKYMECSALTGEGVDDVFEVA 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 61/170 (36%)
RHO2NP_014309.3 Rho2 7..191 CDD:206702 61/176 (35%)

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