DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and RHO5

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_014219.1 Gene:RHO5 / 855541 SGDID:S000005124 Length:331 Species:Saccharomyces cerevisiae


Alignment Length:212 Identity:74/212 - (34%)
Similarity:109/212 - (51%) Gaps:44/212 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 SIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNV----NESPVHL---------- 442
            |||||::||||||||:|::||..|.|..:::||..|.|:..:.:    ..||:.|          
Yeast     3 SIKCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSL 67

  Fly   443 ----------------TICDTAGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPKFA 491
                            .:.|||||:..|.||.||||.:|:||:||||.:..:|..:..||.|:..
Yeast    68 SSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELK 132

  Fly   492 KT-------------KAALILVGTQADLRTSPNVLNKLQTNGEEAISYADAWDLATTIG-AKYIE 542
            :|             |..::||||::|||..|....|||....:.:|..:..:|....| ..|.|
Yeast   133 QTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTE 197

  Fly   543 TSSATQDKVKDVFDTAI 559
            .|:|||..|::||:.|:
Yeast   198 CSAATQAGVREVFEQAV 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 73/211 (35%)
RHO5NP_014219.1 RHO 6..220 CDD:197554 71/209 (34%)

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