DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and RHO3

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_012148.1 Gene:RHO3 / 854688 SGDID:S000001380 Length:231 Species:Saccharomyces cerevisiae


Alignment Length:209 Identity:60/209 - (28%)
Similarity:98/209 - (46%) Gaps:33/209 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 AATTAKKDGKKAIAQPQPSIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNES 438
            :|:|:.|..::         |.|::||||.|||:|:..:....|...:.||..:.|..|:.|:..
Yeast     7 SASTSNKPIER---------KIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSK 62

  Fly   439 PVHLTICDTAGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPKFAK--TKAALILVG 501
            .:.|::.|||||:..|.||.|.|.|:...:||||:...::...::.||..:...  ....|:||.
Yeast    63 HITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVA 127

  Fly   502 TQADLRTSPNVLNKL---------------------QTNGEEAISYADAWDLATTIGA-KYIETS 544
            .:.|||.:.|..|.:                     .:||:..|||.:...:|..||| :|:|.|
Yeast   128 LKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECS 192

  Fly   545 SATQDKVKDVFDTA 558
            :.....|.:.|..|
Yeast   193 AKLNKGVNEAFTEA 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 57/190 (30%)
RHO3NP_012148.1 Rho3 17..231 CDD:206706 57/199 (29%)

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