DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and RAC2

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_199409.1 Gene:RAC2 / 834637 AraportID:AT5G45970 Length:201 Species:Arabidopsis thaliana


Alignment Length:176 Identity:78/176 - (44%)
Similarity:105/176 - (59%) Gaps:5/176 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 IKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLR 457
            ||||.|||||||||.:::||..|.|..:::||..|.::|:|.|:.|.|:|.:.|||||:..:.||
plant     7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLR 71

  Fly   458 ELCYPDSDVFLLCFSVVKPETFRAIKTKWAP--KFAKTKAALILVGTQADLRTSPNVLNKLQTNG 520
            .|.|..:|||||.||::...::..|..||.|  |.......::||||:.|||.....|.  ...|
plant    72 PLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRDDKQFLK--DHPG 134

  Fly   521 EEAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTAIWEGLVP 565
            ..:|:.|...:|...||| :|:|.||.||..||.||||||...|.|
plant   135 AASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALRP 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 76/171 (44%)
RAC2NP_199409.1 Rop_like 6..178 CDD:206705 76/172 (44%)

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