DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and ROP9

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_194624.1 Gene:ROP9 / 829016 AraportID:AT4G28950 Length:209 Species:Arabidopsis thaliana


Alignment Length:190 Identity:77/190 - (40%)
Similarity:104/190 - (54%) Gaps:21/190 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 IKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLR 457
            ||||.|||||||||.:::.|..|:|..::|||..|.::|:|.|:...|:|.:.|||||:....||
plant     7 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDYSRLR 71

  Fly   458 ELCYPDSDVFLLCFSVVKPETFRAIKTKWAPKFAK--TKAALILVGTQADLRTS-------PNVL 513
            .|.|..:|:|:|.||::...::..:..||.|:..:  ....::||||:.|||..       .||:
plant    72 PLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKGYLADHTNVI 136

  Fly   514 NKLQTNGEEAISYADAWDLATTIG-AKYIETSSATQDKVKDVFDTAIWEGLVPTTLPPTP 572
            .  .|.|||         |...|| |.|||.||.||..||.||||||...|.|......|
plant   137 T--STQGEE---------LRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEVP 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 74/178 (42%)
ROP9NP_194624.1 Rop_like 6..176 CDD:206705 74/179 (41%)

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