DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and ROP10

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_566897.1 Gene:ROP10 / 823959 AraportID:AT3G48040 Length:208 Species:Arabidopsis thaliana


Alignment Length:171 Identity:71/171 - (41%)
Similarity:101/171 - (59%) Gaps:7/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 IKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLR 457
            ||||.|||||||||.:::.|..|:|..::|||..|.::.:|.|....|:|.:.|||||:..:.||
plant     9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDTAGQEDYNRLR 73

  Fly   458 ELCYPDSDVFLLCFSVVKPETFRAIKTKWAPK---FAKTKAALILVGTQADLRTSPNVLNKLQTN 519
            .|.|..:|||:|.||::...::..:..||.|:   || ....::||||:.|||...:.|:  ...
plant    74 PLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFA-PGVPIVLVGTKMDLREDRHYLS--DHP 135

  Fly   520 GEEAISYADAWDLATTIGAK-YIETSSATQDKVKDVFDTAI 559
            |...::.:...:|...|||. |||.||.||..||.|||.||
plant   136 GLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 71/171 (42%)
ROP10NP_566897.1 Rop_like 8..180 CDD:206705 71/171 (42%)

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