DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and ARAC1

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_179371.1 Gene:ARAC1 / 816290 AraportID:AT2G17800 Length:197 Species:Arabidopsis thaliana


Alignment Length:176 Identity:76/176 - (43%)
Similarity:103/176 - (58%) Gaps:5/176 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 IKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLR 457
            ||||.|||||||||.|::||..|.|..:::||..|.::|:|.||.:.|:|.:.|||||:..:.||
plant     7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLR 71

  Fly   458 ELCYPDSDVFLLCFSVVKPETFRAIKTKWAP--KFAKTKAALILVGTQADLRTSPNVLNKLQTNG 520
            .|.|..:|||:|.||::...::..:..||.|  |.......::||||:.|||......  :...|
plant    72 PLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFF--IDHPG 134

  Fly   521 EEAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTAIWEGLVP 565
            ...|:.|...:|...||| .|||.||.||:.||.|||.||...|.|
plant   135 AVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 74/171 (43%)
ARAC1NP_179371.1 Rop_like 6..178 CDD:206705 74/172 (43%)

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