Protein Alignment RhoU and rnd3a

DIOPT Version :9

• Sequence 1: NP_001036266.1
• Gene: RhoU / 31945
• FlyBaseID: FBgn0083940
• Length: 582
• Species: Drosophila melanogaster
• Sequence 2: NP_955816.1
• Gene: rnd3a / 80963
• ZFINID: ZDB-GENE-010319-40
• Length: 243
• Species: Danio rerio
• Alignment Length: 177
• Identity: 60/177 - (33%)
• Similarity: 100/177 - (56%)
• Gaps: 9/177 - (5%)

  Fly   389 PQPSIKC--VLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQD 451
            |..|:||  |:|||...|||.|:..:.::.|...::||..:.|.|...:::..:.|::.||:|..
Zfish    18 PSQSLKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDKQRIELSLWDTSGSP 82

  Fly   452 TLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPKFAK----TKAALILVGTQADLRTSPNV 512
            ..|.:|.|.|||||..::||.:.:|||..::..||..:..:    ||  ::|||.::||||....
Zfish    83 YYDNVRPLSYPDSDAVIICFDISRPETLDSVLKKWKGEIQEFCPNTK--MLLVGCKSDLRTDLTT 145

  Fly   513 LNKLQTNGEEAISYADAWDLATTIGAKYIETSSA-TQDKVKDVFDTA 558
            |.:|..:.:..:||.....:|..|.|.|||.|:. :::.|:|:|..|
Zfish   146 LVELSNHRQTPVSYDQGSAMAKQISAPYIECSAVQSENSVRDIFHVA 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RhoU	NP_001036266.1	Wrch_1	393..562	CDD:133330	58/173 (34%)
		RHO	395..559	CDD:197554	57/171 (33%)
rnd3a	NP_955816.1	Rnd3_RhoE_Rho8	19..197	CDD:206735	59/176 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900