Protein Alignment RhoU and Rhof

DIOPT Version :9

• Sequence 1: NP_001036266.1
• Gene: RhoU / 31945
• FlyBaseID: FBgn0083940
• Length: 582
• Species: Drosophila melanogaster
• Sequence 2: XP_001073389.2
• Gene: Rhof / 690130
• RGDID: 1584038
• Length: 211
• Species: Rattus norvegicus
• Alignment Length: 196
• Identity: 66/196 - (33%)
• Similarity: 103/196 - (52%)
• Gaps: 18/196 - (9%)

  Fly   368 AAATTEAATTAKKDGKKAIAQPQPSIKCVLVGDGAVGKTNLILSYLENRFNPEH-IPTASDIYNA 431
            |.|...|.::|:|:           :|.|:||||..|||:|::.|.:..| ||| .|:..:.|.|
  Rat     6 APAPAAAPSSARKE-----------LKIVIVGDGGCGKTSLLMVYCQGSF-PEHYAPSVFEKYTA 58

  Fly   432 DVNVNESPVHLTICDTAGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPK---FAKT 493
            .|.|....|.|.:.|||||:..|.||.|.|.::.:.|:|:.|:.|.::..:..||.|:   |.:
  Rat    59 SVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCR- 122

  Fly   494 KAALILVGTQADLRTSPNVLNKLQTNGEEAISYADAWDLATTI-GAKYIETSSATQDKVKDVFDT 557
            ...::|:|.:.|||.....|.||:....|.|:|.........: ||.|:|.|:..::.|:|||..
  Rat   123 GIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLSACEQMRGALYLECSAKFRENVEDVFRE 187

  Fly   558 A 558
            |
  Rat   188 A 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RhoU	NP_001036266.1	Wrch_1	393..562	CDD:133330	61/171 (36%)
		RHO	395..559	CDD:197554	60/169 (36%)
Rhof	XP_001073389.2	Rho4_like	17..211	CDD:206704	62/185 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1091615at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910