Protein Alignment RhoU and Rhob

DIOPT Version :9

• Sequence 1: NP_001036266.1
• Gene: RhoU / 31945
• FlyBaseID: FBgn0083940
• Length: 582
• Species: Drosophila melanogaster
• Sequence 2: NP_071987.1
• Gene: Rhob / 64373
• RGDID: 621309
• Length: 196
• Species: Rattus norvegicus
• Alignment Length: 168
• Identity: 67/168 - (39%)
• Similarity: 99/168 - (58%)
• Gaps: 3/168 - (1%)

  Fly   394 KCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLRE 458
            |.|:|||||.|||.|::.:.::.|...::||..:.|.||:.|:...|.|.:.|||||:..|.||.
  Rat     7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71

  Fly   459 LCYPDSDVFLLCFSVVKPETFRAIKTKWAP--KFAKTKAALILVGTQADLRTSPNVLNKLQTNGE 521
            |.|||:||.|:||||..|::...|..||.|  |.......:|||..:.|||:..:|..:|....:
  Rat    72 LSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQ 136

  Fly   522 EAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTA 558
            |.:...|...:|..|.| .|:|.|:.|::.|::||:||
  Rat   137 EPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RhoU	NP_001036266.1	Wrch_1	393..562	CDD:133330	67/168 (40%)
		RHO	395..559	CDD:197554	66/167 (40%)
Rhob	NP_071987.1	RhoA_like	5..179	CDD:206662	67/168 (40%)
		Effector region. /evidence=ECO:0000255	34..42		2/7 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900