DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and cdc42l2

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_021325488.1 Gene:cdc42l2 / 556226 ZFINID:ZDB-GENE-060312-21 Length:204 Species:Danio rerio


Alignment Length:187 Identity:77/187 - (41%)
Similarity:107/187 - (57%) Gaps:9/187 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 KKAIAQPQPSIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDT 447
            |:.:|....:||||:|||.|||||.|::|: .|:|..|  ||..:..:..|.:...|..:.:.:.
Zfish    13 KQLVATAMSTIKCVVVGDEAVGKTCLLVSF-TNKFPSE--PTVFNTQSVTVMMGGEPYTIRLFNA 74

  Fly   448 AGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPK--FAKTKAALILVGTQADLRTSP 510
            ||||.|.||.   ||.:||||:|||||...:|..:|.||.|:  |...|...:|||||.|||..|
Zfish    75 AGQDQLRPLN---YPQTDVFLVCFSVVSLSSFENVKEKWVPEITFYAPKTPFLLVGTQIDLRDDP 136

  Fly   511 NVLNKLQTNGEEAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTAIWEGLVPT 566
            ..:.:|..|.::.|....|..||..:.| ||:|.|:.|...:|:|||.||...|.|:
Zfish   137 VTVARLAKNKQKPIKPEAAEKLARELKAVKYVECSALTLKGLKNVFDEAILAALQPS 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 73/171 (43%)
cdc42l2XP_021325488.1 P-loop containing Nucleoside Triphosphate Hydrolases 22..190 CDD:476819 73/173 (42%)

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