DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and RHOF

DIOPT Version :9

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_061907.2 Gene:RHOF / 54509 HGNCID:15703 Length:211 Species:Homo sapiens


Alignment Length:189 Identity:67/189 - (35%)
Similarity:100/189 - (52%) Gaps:13/189 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 DGKKAIAQ---PQP---SIKCVLVGDGAVGKTNLILSYLENRFNPEH-IPTASDIYNADVNVNES 438
            |...|:||   |.|   .:|.|:||||..|||:|::.|.:..| ||| .|:..:.|.|.|.|...
Human     2 DAPGALAQTAAPGPGRKELKIVIVGDGGCGKTSLLMVYSQGSF-PEHYAPSVFEKYTASVTVGSK 65

  Fly   439 PVHLTICDTAGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPK---FAKTKAALILV 500
            .|.|.:.|||||:..|.||.|.|.::.:.|:|:.|:.|.::..:..||.|:   |.: ...::|:
Human    66 EVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCR-GIPMVLI 129

  Fly   501 GTQADLRTSPNVLNKLQTNGEEAISYADAWDLATTI-GAKYIETSSATQDKVKDVFDTA 558
            |.:.|||.....|.||:....|.|:|.........| .|.|:|.|:..::.|:|||..|
Human   130 GCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVEDVFREA 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 61/171 (36%)
RHO 395..559 CDD:197554 60/169 (36%)
RHOFNP_061907.2 Rho4_like 17..211 CDD:206704 61/174 (35%)
RHO 22..195 CDD:197554 60/169 (36%)
Effector region. /evidence=ECO:0000255 48..56 1/7 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091615at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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