DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and rhoac

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_998515.1 Gene:rhoac / 406659 ZFINID:ZDB-GENE-040426-2665 Length:193 Species:Danio rerio


Alignment Length:168 Identity:66/168 - (39%)
Similarity:99/168 - (58%) Gaps:3/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 KCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLRE 458
            |.|:|||||.|||.|::.:.:::|...::||..:.|.||:.|:...|.|.:.|||||:..|.||.
Zfish     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRP 71

  Fly   459 LCYPDSDVFLLCFSVVKPETFRAIKTKWAP--KFAKTKAALILVGTQADLRTSPNVLNKLQTNGE 521
            |.|||:||.|:|||:..|::...|..||.|  |.......:||||.:.|||...:...:|....:
Zfish    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQ 136

  Fly   522 EAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTA 558
            |.:...:..|:|..|.| .|:|.|:.|:|.|::||:.|
Zfish   137 EPVKPEEGRDMANRINAFGYLECSAKTKDGVREVFEMA 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 66/168 (39%)
rhoacNP_998515.1 RhoA_like 5..179 CDD:206662 66/168 (39%)

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