DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoU and Rho1

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_477098.1 Gene:Rho1 / 36775 FlyBaseID:FBgn0014020 Length:192 Species:Drosophila melanogaster


Alignment Length:168 Identity:68/168 - (40%)
Similarity:100/168 - (59%) Gaps:3/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 KCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPLRE 458
            |.|:|||||.|||.|::.:.:::|...::||..:.|.||:.|:...|.|.:.|||||:..|.||.
  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71

  Fly   459 LCYPDSDVFLLCFSVVKPETFRAIKTKWAP--KFAKTKAALILVGTQADLRTSPNVLNKLQTNGE 521
            |.|||:||.|:||||..|::...|..||.|  |.......:||||.:.|||..||.:..|....:
  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQ 136

  Fly   522 EAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTA 558
            |.:...:...:|..|.| .|:|.|:.:::.|:|||:||
  Fly   137 EPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETA 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 68/168 (40%)
Rho1NP_477098.1 RhoA_like 5..179 CDD:206662 68/168 (40%)

Return to query results.
Submit another query.