DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and RHOD

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_055393.1 Gene:RHOD / 29984 HGNCID:670 Length:210 Species:Homo sapiens


Alignment Length:224 Identity:86/224 - (38%)
Similarity:120/224 - (53%) Gaps:24/224 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 TAAAAATTEAATTAKKDGKKAIAQPQPSIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIY 429
            |||.||..||....:            |:|.||||||..|||:|::.:.:..|...:.||..:.|
Human     2 TAAQAAGEEAPPGVR------------SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY 54

  Fly   430 NADVNVNESPVHLTICDTAGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPK---FA 491
            ..::.|...||||.|.||||||..|.||.|.|||:.|.||||.|..|.:|..|..:|.|:   |.
Human    55 MVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119

  Fly   492 KTKAALILVGTQADLRTSPNVLNKLQTNGEEAISYADAWDLATTIGA-KYIETSSATQDKVKDVF 555
            | |..:|:||.:.|||...:::|||:.||.|.::|....::|.::|| .|:|.|:...|.|..||
Human   120 K-KVPIIVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183

  Fly   556 DTAIWEGLVPTTLPPTPSFWRKL---FCL 581
            ..|....|...    ..:|||::   ||:
Human   184 QEAAEVALSSR----GRNFWRRITQGFCV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 72/172 (42%)
RHODNP_055393.1 Rho4_like 16..210 CDD:206704 79/210 (38%)

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