DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RhoU and Rhod

DIOPT Version :9

Sequence 1:	NP_001036266.1	Gene:	RhoU / 31945	FlyBaseID:	FBgn0083940	Length:	582	Species:	Drosophila melanogaster
Sequence 2:	NP_001099793.1	Gene:	Rhod / 293660	RGDID:	1310985	Length:	210	Species:	Rattus norvegicus

Alignment Length:	211	Identity:	78/211 - (36%)
Similarity:	117/211 - (55%)	Gaps:	13/211 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly   378 AKKDGKKAIAQPQPSIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHL 442
            ::.:|::|....:| ||.||||||..|||:|::.:....|...:.||..:.|||.:.:...||.|
  Rat     4 SQTEGEEAPHSGRP-IKVVLVGDGGCGKTSLMMVFANGAFPESYNPTVFERYNATLQMKGKPVRL 67

  Fly   443 TICDTAGQDTLDPLRELCYPDSDVFLLCFSVVKPETFRAIKTKWAPK---FAKTKAALILVGTQA 504
            .|.||||||..|.||.|.|||::|.||||.|..|.:|..:..:|.|:   |.| ...:|:||.:.
  Rat    68 QIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCK-GVPIIVVGCKI 131

  Fly   505 DLRTSPNVLNKLQTNGEEAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTAIWEGLVPTTL 568
            |||....::|.|:....|.::|....|:|.::|| .|:|.|:...|.|:.||..|....|...
  Rat   132 DLRKDKVLVNTLRKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVEAVFQEAAEVALSSR-- 194

  Fly   569 PPTPSFWRKL---FCL 581
              :.:|||::   ||:
  Rat   195 --SHNFWRRITQNFCV 208

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RhoU	NP_001036266.1	Wrch_1	393..562	CDD:133330	69/172 (40%)
RhoU	NP_001036266.1	RHO	395..559	CDD:197554	66/167 (40%)
Rhod	NP_001099793.1	Rho4_like	16..210	CDD:206704	76/199 (38%)
Rhod	NP_001099793.1	RHO	20..192	CDD:197554	67/172 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810