DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and Rac2

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_033034.1 Gene:Rac2 / 19354 MGIID:97846 Length:192 Species:Mus musculus


Alignment Length:192 Identity:85/192 - (44%)
Similarity:115/192 - (59%) Gaps:8/192 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 SIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPL 456
            :||||:|||||||||.|::||..|.|..|:|||..|.|:|:|.|:..||:|.:.|||||:..|.|
Mouse     3 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRL 67

  Fly   457 RELCYPDSDVFLLCFSVVKPETFRAIKTKWAPKFAK--TKAALILVGTQADLRTSPNVLNKLQTN 519
            |.|.||.:||||:|||:|.|.::..::.||.|:...  ....:|||||:.|||...:.:.||:..
Mouse    68 RPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEK 132

  Fly   520 GEEAISYADAWDLATTI-GAKYIETSSATQDKVKDVFDTAIWEGLVPTTLPPTPSFWRKLFC 580
            ....|:|.....||..| ..||:|.|:.||..:|.|||.||     ...|.|.|:..:|..|
Mouse   133 KLAPITYPQGLALAKDIDSVKYLECSALTQRGLKTVFDEAI-----RAVLCPQPTRQQKRPC 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 80/171 (47%)
Rac2NP_033034.1 Rac1_like 3..176 CDD:206663 80/177 (45%)
Effector region. /evidence=ECO:0000255 32..40 4/7 (57%)

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