DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoU and Rac1

DIOPT Version :10

Sequence 1:NP_001036266.1 Gene:RhoU / 31945 FlyBaseID:FBgn0083940 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001334459.1 Gene:Rac1 / 19353 MGIID:97845 Length:211 Species:Mus musculus


Alignment Length:212 Identity:90/212 - (42%)
Similarity:118/212 - (55%) Gaps:27/212 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 SIKCVLVGDGAVGKTNLILSYLENRFNPEHIPTASDIYNADVNVNESPVHLTICDTAGQDTLDPL 456
            :||||:|||||||||.|::||..|.|..|:|||..|.|:|:|.|:..||:|.:.|||||:..|.|
Mouse     3 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRL 67

  Fly   457 RELCYPD-------------------SDVFLLCFSVVKPETFRAIKTKWAPKFAK--TKAALILV 500
            |.|.||.                   :||||:|||:|.|.:|..::.||.|:...  ....:|||
Mouse    68 RPLSYPQTVGDTCGKDRPSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILV 132

  Fly   501 GTQADLRTSPNVLNKLQTNGEEAISYADAWDLATTIGA-KYIETSSATQDKVKDVFDTAIWEGLV 564
            ||:.|||...:.:.||:......|:|.....:|..||| ||:|.|:.||..:|.|||.||...|.
Mouse   133 GTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 197

  Fly   565 PTTLPPTPSFWRKLFCL 581
            |   ||...  ||..||
Mouse   198 P---PPVKK--RKRKCL 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoUNP_001036266.1 Wrch_1 393..562 CDD:133330 82/190 (43%)
Rac1NP_001334459.1 Rac1_like 3..195 CDD:206663 82/191 (43%)

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