DRSC/TRiP Functional Genomics Resources

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Protein Alignment Naxe and EDC3

DIOPT Version :10

Sequence 1:NP_572604.2 Gene:Naxe / 31944 FlyBaseID:FBgn0030178 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_010901.1 Gene:EDC3 / 856700 SGDID:S000000741 Length:551 Species:Saccharomyces cerevisiae


Alignment Length:206 Identity:44/206 - (21%)
Similarity:72/206 - (34%) Gaps:70/206 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VDQELFNDYKFSVDQLMELAGLSCAHAV-AKCFPAEK--------------HPRILVCCGPGN-N 62
            ::.|......||::.    |||....|| |..|..:|              .|.:::.....| :
Yeast   291 LEMESITSEFFSINS----AGLLENFAVNASFFLKQKLGGRARLRLQNSNPEPLVVILASDSNRS 351

  Fly    63 GGDGLVAARHLALMGYTPTIYYPKPTAKPLFENLSHQCQQMDICD---------VKEC------- 111
            |...|...|||...|:...|        .||     .|.|.::.|         .|:|       
Yeast   352 GAKALALGRHLCQTGHIRVI--------TLF-----TCSQNELQDSMVKKQTDIYKKCGGKIVNS 403

  Fly   112 -PSVESAAR----DYDLILDALFGFSFKPPVRADFVAVVELM-------------QQTKLPIASV 158
             .|:|||..    ..::::||:.|:..   ..:|.....|::             |:....:.|:
Yeast   404 VSSLESAMETLNSPVEIVIDAMQGYDC---TLSDLAGTSEVIESRIKSMISWCNKQRGSTKVWSL 465

  Fly   159 DIPSGWDVEKG 169
            |||:|:|...|
Yeast   466 DIPNGFDAGSG 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaxeNP_572604.2 PLN03049 3..>230 CDD:215550 44/206 (21%)
EDC3NP_010901.1 Edc3_Lsm 4..63 CDD:439343
FDF 99..202 CDD:430668
YjeF_N 305..498 CDD:427546 41/192 (21%)
Blue background indicates that the domain is not in the aligned region.

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