DRSC/TRiP Functional Genomics Resources

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Protein Alignment Naxe and EDC3

DIOPT Version :10

Sequence 1:NP_572604.2 Gene:Naxe / 31944 FlyBaseID:FBgn0030178 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_079359.2 Gene:EDC3 / 80153 HGNCID:26114 Length:508 Species:Homo sapiens


Alignment Length:246 Identity:50/246 - (20%)
Similarity:98/246 - (39%) Gaps:66/246 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKYLNQKEAIAVDQELFNDYKFSVDQLMELAGLSCAHAVA--------KCFPAEKH--PRILVCC 57
            :.|...|:.::|.::    :..::::.:|:.|: ||..:|        :..|...|  |.:.:.|
Human   282 ISYELHKKLLSVAEK----HGLTLERRLEMTGV-CASQMALTLLGGPNRLNPKNVHQRPTVALLC 341

  Fly    58 GPGNNGGDGLVAARHLALMGYTPTIYYPKPTAKPLFENLSHQ------CQQMDICDVKECPSVES 116
            ||...|..|:...||||  .:...:....|....:.|:::::      .|...:..:|:.|:   
Human   342 GPHVKGAQGISCGRHLA--NHDVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSLKDLPT--- 401

  Fly   117 AARDYDLILDALFGFSFKPPVRAD------------FVAVVELMQQTKLPIASVDIPSGWDVEKG 169
              ...||:::.|           |            :.|.|....|.:.|:.|:| |...:||:|
Human   402 --SPVDLVINCL-----------DCPENVFLRDQPWYKAAVAWANQNRAPVLSID-PPVHEVEQG 452

  Fly   170 KLTECDVEPALLISLTAPKLCARQFRGEHH---YLGGRFVPPALQRKYELN 217
                .|.:.:|.:.|..|       .|||.   ||....:|..:.::..:|
Human   453 ----IDAKWSLALGLPLP-------LGEHAGRIYLCDIGIPQQVFQEVGIN 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaxeNP_572604.2 PLN03049 3..>230 CDD:215550 50/246 (20%)
EDC3NP_079359.2 Required for P-body targeting and interaction with DCP1A. /evidence=ECO:0000250 1..79
LSm16_N 2..66 CDD:212484
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..192
Edc3_linker 102..194 CDD:465188
Required for interaction with DDX6. /evidence=ECO:0000250 191..296 3/13 (23%)
FDF 198..301 CDD:430668 3/22 (14%)
YjeF_N 302..455 CDD:427546 36/176 (20%)
Blue background indicates that the domain is not in the aligned region.

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