DRSC/TRiP Functional Genomics Resources

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Protein Alignment Naxe and Edc3

DIOPT Version :10

Sequence 1:NP_572604.2 Gene:Naxe / 31944 FlyBaseID:FBgn0030178 Length:230 Species:Drosophila melanogaster
Sequence 2:XP_036010982.1 Gene:Edc3 / 353190 MGIID:2142951 Length:517 Species:Mus musculus


Alignment Length:216 Identity:47/216 - (21%)
Similarity:90/216 - (41%) Gaps:47/216 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKYLNQKEAIAVDQELFNDYKFSVDQLMELAGLSCAHAVA--------KCFPAEKH--PRILVCC 57
            :.|...|:.::|.::    :..::::.:|:.|: ||..:|        :..|...|  |.:.:.|
Mouse   282 VSYELHKKLLSVAEK----HGLTLERRLEMTGV-CASQMALTLLGGPNRLNPKNVHQRPTVALLC 341

  Fly    58 GPGNNGGDGLVAARHLALMGYTPTIYYPKPTAKPLFENLSHQ------CQQMDICDVKECPSVES 116
            ||...|..|:...||||  .:...:....|....:.|:::::      .|...:..:::.|    
Mouse   342 GPHVKGAQGISCGRHLA--NHDVQVILFLPNFVKMLESITNELSLFSKTQGQQVSSLRDLP---- 400

  Fly   117 AARDYDLILDAL----FGFSFKPPVRADFVAVVELMQQTKLPIASVDIPSGWDVEKGKLTECDVE 177
             |...||:::.|    ..|....|.   :.|.|....|.:.|:.|:| |...:||:|    .|.:
Mouse   401 -ASPVDLVINCLDCPENAFLRDQPW---YKAAVAWANQNRAPVLSID-PPVHEVEQG----IDAK 456

  Fly   178 PALLISLTAPKLCARQFRGEH 198
            .:|.:.|..|       .|||
Mouse   457 WSLALGLPLP-------LGEH 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaxeNP_572604.2 PLN03049 3..>230 CDD:215550 47/216 (22%)
Edc3XP_036010982.1 LSm16_N 4..66 CDD:212484
Edc3_linker 102..194 CDD:465188
FDF 198..301 CDD:430668 3/22 (14%)
YjeF_N 302..455 CDD:427546 37/168 (22%)
Blue background indicates that the domain is not in the aligned region.

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