DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2972 and nob1

DIOPT Version :9

Sequence 1:NP_001285072.1 Gene:CG2972 / 31943 FlyBaseID:FBgn0030177 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_001016830.1 Gene:nob1 / 549584 XenbaseID:XB-GENE-1016105 Length:436 Species:Xenopus tropicalis


Alignment Length:481 Identity:176/481 - (36%)
Similarity:258/481 - (53%) Gaps:68/481 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAETSEKIKFLVADTTAFINAVPLNEYAEQVLTVPDVVAEVRNKRQIRRLCVLPFDLQVREPRPE 65
            ||.|  |::.:|||..||:....|......:.||.:||:|:|:|...|||.|||::||.:||.||
 Frog     1 MAPT--KVQHVVADAGAFLRNAALQNIGTNIYTVREVVSEIRDKATRRRLAVLPYELQFQEPSPE 63

  Fly    66 SIKHCVEFAKKTGDYASLSGIDLKVISLTYELEADNVGTDHLRQEPVMAQTIASKDKPEEMQDAN 130
            :|:|..||:||||||||||..|:||::|||:||.::||.:||:.||....:|.|..:..|..   
 Frog    64 NIQHVTEFSKKTGDYASLSATDIKVLALTYQLETEHVGKEHLKAEPSQKVSIRSTSQHPEAP--- 125

  Fly   131 NKRLVGWYMPEGEEEEEEDSEEEDDYSQEEDDAEGDEQEANESPDTVKA---AIEAQLAGKEPFA 192
             ..:.|::.|.....:::.|..|               ...|:||.:.:   ..::.|..:.|. 
 Frog   126 -VNVAGFHFPSKATNKKDCSTRE---------------PTEENPDNLSSENTEFDSFLFWRSPL- 173

  Fly   193 SETIEKEEDQDQEPSQEELDKLFEQLKCA------PSAEEEKELSELLVSQPAEVDEEVSEPQEA 251
                         ||.|  |.|.|.::.|      |:||:|.....|:  ......||:  |...
 Frog   174 -------------PSIE--DDLLELMQNAQVVSVTPNAEQEATPVGLI--DKCHALEEL--PDAG 219

  Fly   252 KQSQNLDEDVGDDGWITHSNIKKAKKALEGKVETDEVP---PVACMTTDYALQNVLKQLNLHLAA 313
            ..|:  :|:..|.||||.||||:    :...:...|.|   .|.|:|||:::||||.|:.||:.|
 Frog   220 TSSE--EEENDDQGWITPSNIKQ----IHQDMAVREAPVNVVVGCLTTDFSMQNVLIQMGLHVLA 278

  Fly   314 LNGRIIKQLRTYILRCYACYKTTSIMTKVFCPNCGNKTLKRVAVSLDENGRQVIHINTR-RPLTN 377
            ::|.:|:|.|.|||||:.|:.|||.|.|.|||.|||.|||:||||:.|:|...:|::.. :.|.:
 Frog   279 VDGMLIRQTRNYILRCHGCFMTTSDMCKTFCPKCGNPTLKKVAVSVSEDGSVHMHLSKNPKVLNS 343

  Fly   378 KYKNQSLPRFQGGKHSRNPILFEDQPMPRQMPSRVAKTKTNALDQDYTAGFSPFVLRDVDSKSAM 442
            :....|||..|||||.:||.|..||..|::..|:.|:.||:..:.||.|..|||...|:.|::|.
 Frog   344 RGMRYSLPAPQGGKHGKNPYLVVDQRFPQERQSKKARAKTDVFNPDYIAEVSPFAENDIYSRAAN 408

  Fly   443 LRSKGNLKEWARNNNFEEDRRRKNYN 468
            |:        .|:......|||.|.|
 Frog   409 LQ--------IRDGALGAGRRRINPN 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2972NP_001285072.1 PIN_Nob1 11..120 CDD:189046 54/108 (50%)
PIN_SF <279..355 CDD:301351 39/78 (50%)
NOB1_Zn_bind 319..390 CDD:285925 35/71 (49%)
nob1NP_001016830.1 PIN_6 9..95 CDD:375017 45/85 (53%)
WRNPLPNID 161..236 CDD:373479 24/96 (25%)
Nob1 <223..330 CDD:224356 55/112 (49%)
NOB1_Zn_bind 284..356 CDD:370110 35/71 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7156
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31924
Inparanoid 1 1.050 269 1.000 Inparanoid score I2953
OMA 1 1.010 - - QHG54261
OrthoDB 1 1.010 - - D409120at33208
OrthoFinder 1 1.000 - - FOG0005109
OrthoInspector 1 1.000 - - oto104140
Panther 1 1.100 - - LDO PTHR12814
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R821
SonicParanoid 1 1.000 - - X3629
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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