DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2972 and nobh-1

DIOPT Version :10

Sequence 1:NP_572603.1 Gene:CG2972 / 31943 FlyBaseID:FBgn0030177 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_491090.1 Gene:nobh-1 / 171874 WormBaseID:WBGene00021843 Length:364 Species:Caenorhabditis elegans


Alignment Length:469 Identity:158/469 - (33%)
Similarity:223/469 - (47%) Gaps:109/469 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAETSEKIKFLVADTTAFINAVPLNEYAEQVLTVPDVVAEVRNKRQIRRLCVLPFDLQVREPRPE 65
            |....:.||.||.||.|.|....|:..|:.....|.::.|:|:....:....|||::.:|||...
 Worm     1 MTNKEKPIKHLVIDTCAIIANRNLHALADHYYAPPQILDELRSSAARKLWNTLPFEVTLREPTQT 65

  Fly    66 SIKHCVEFAKKTGDYASLSGIDLKVISLTYELEADNVGTDHLRQEPVMAQTIASKDKPEEMQDAN 130
            :::..::.:|.|||:.|||.:|:|:|:|||:|.         ||                     
 Worm    66 ALRAVIDASKTTGDFQSLSMVDIKMIALTYDLH---------RQ--------------------- 100

  Fly   131 NKRLVGWYMPEGEEEEEEDSEEEDDYSQEEDDAEGDEQEANESPDTVKAAIEAQLAGKEPFASET 195
                                     |..|.|.||..|.:..::.:.:.|.:|....|        
 Worm   101 -------------------------YVAENDVAETTEDDEKKNIEDLSAKVEQVTVG-------- 132

  Fly   196 IEKEEDQDQEPSQEELDKLFEQLKCAPSAEEEKELSELLVSQPAEVDEEVSEPQEAKQSQNLDED 260
             |..||    ..:||:              ||.|.||         |..|||..|:.:|   .|.
 Worm   133 -ENTED----TKEEEI--------------EENEESE---------DSAVSEGSESSES---SES 166

  Fly   261 VGDDGWITHSNIKKAKKALEGKVETDEVPPVACMTTDYALQNVLKQLNLHLAALNGRIIKQLRTY 325
            ..:|||||..||::..|.| |..|.:|...|.|:|||:||||||..:||.|.:|:|..|::|:::
 Worm   167 FDEDGWITQDNIEETLKKL-GAFEIEENMLVGCLTTDFALQNVLLAMNLSLVSLSGYRIRKLKSF 230

  Fly   326 ILRCYACYKTTSIMTKVFCPNCGNKTLKRVAVSLDENGRQVIHINTRRPLTNKYKNQSLPRFQGG 390
            :|||..|:.|||:|||.|||.||:|||.:.|||:||:|.|.:|||..|....:....:|...:||
 Worm   231 VLRCRTCFSTTSVMTKEFCPACGHKTLHKCAVSVDEDGNQQLHINWNRMANRRGLVYTLANPKGG 295

  Fly   391 KHSRNPILFEDQPMPRQMPSRVAKTKTNALDQDYTAGFSPFVLRDVDSKSAML--RSKGNLKEWA 453
            ||:.|..||||||||..   |:||...:.|..      .||.:.||.|:||||  |:..|..:..
 Worm   296 KHATNERLFEDQPMPHM---RMAKIHMDPLAD------GPFSVHDVTSRSAMLGVRTINNRAKQN 351

  Fly   454 RNNNFEEDR--RRK 465
            ||.| |..|  |||
 Worm   352 RNPN-ESKRGGRRK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2972NP_572603.1 PIN_6 11..97 CDD:465362 30/85 (35%)
Nob1 <277..358 CDD:441048 42/80 (53%)
NOB1_Zn_bind 319..390 CDD:462597 32/70 (46%)
nobh-1NP_491090.1 PIN_6 11..97 CDD:465362 30/85 (35%)
NOB1_Zn_bind 224..295 CDD:462597 32/70 (46%)

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