DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15312 and Vsig10

DIOPT Version :10

Sequence 1:NP_001245603.1 Gene:CG15312 / 31940 FlyBaseID:FBgn0030174 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001258265.1 Gene:Vsig10 / 304529 RGDID:1565800 Length:564 Species:Rattus norvegicus


Alignment Length:486 Identity:99/486 - (20%)
Similarity:153/486 - (31%) Gaps:167/486 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 YATDKGGNVSIPCIAQGN-----IMWVKEH-------GNNSTIVQTGRVLVLRNVSTTDAGIYVC 87
            ||. :|..|...|.:...     ..|::.|       |.|.:......:|:.:|:.    |.|.|
  Rat   168 YAA-RGSQVDFSCCSAAQPPPEVEWWIQTHSSVSESLGKNLSANSFTLMLMSKNLQ----GNYTC 227

  Fly    88 FAS-----------------VPRPSTTATSATTSPQ--NLQ---------DKETRPLEDEDDG-- 122
            .|:                 .|.||....||..||:  ||:         ...|....:|..|  
  Rat   228 SATNVLSRRQRKVTTELLVYWPPPSAPQCSAGLSPESANLELTCNWDGGYPDPTFLWTEEPGGVV 292

  Fly   123 ----QGESVSPKDDQLKEAEMEEEVEYLAHQRTKLIVRTVPGPVSQLYFKASTILGFLIWRFNKT 183
                :.:::||  .||.|.           ::.|.:...:.||.|............|..|..||
  Rat   293 VGNSKLQTLSP--SQLSEG-----------KKFKCVGSHILGPESGASCVVQISSPLLASRPMKT 344

  Fly   184 QSGGYPVRSFTAEYRNVSYKTPPANASFEHAWSRMDPINIAFNVRQMEVYRLAPNTTYEFRIWAN 248
            ...|..| :.|.:   |....|||...    |.|        |:.|.|. .:.|::.|..     
  Rat   345 CLVGGDV-TLTCQ---VEGANPPARIQ----WLR--------NLTQPET-AIQPSSRYVI----- 387

  Fly   249 NELGSGEVVTTNVTTLPE------TKEEDLIRLIKPDLDNFDPRIWI-----VAVSIVLGTLV-I 301
            .:.|....:|.:..:..:      .:.|:.:.:...|       ||:     :.|..::||:| :
  Rat   388 TQQGQSSSLTIHNCSQDQDGGFYFCRAENPVGVRAAD-------IWLSVKEPLNVGGIVGTVVSL 445

  Fly   302 LAIGLCIVLSKECYQSAQMELQDGWDSIELIPNIILNPGFSESDGGPEPGGQGHGGSAGDQDAG- 365
            |.:||.||.....|.|                     |.|....|....|          ||.| 
  Rat   446 LLLGLAIVSGLMLYYS---------------------PAFCWKAGSTLRG----------QDMGD 479

  Fly   366 -------EDDDDDVAMPFPRTIIFGQHHRTPPPPRLHLPPQHHRHQNQSHHHQYHHQQNQQQHHH 423
                   |:::::.........:.||..|....   .||.:..:|   .|.|:.....|      
  Rat   480 VMVLVDSEEEEEEEENKGALAEVVGQETRETEE---ELPKEIGKH---GHIHRVTALVN------ 532

  Fly   424 HHLRR--------QDDDD---DDDYEEEHEP 443
            .:|.|        |||.|   .|..|||.:|
  Rat   533 GNLDRMGNGLQEFQDDSDGQQSDIVEEEDKP 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15312NP_001245603.1 Ig 39..90 CDD:472250 12/62 (19%)
Ig strand B 43..47 CDD:409358 1/3 (33%)
Ig strand C 52..56 CDD:409358 0/8 (0%)
Ig strand F 84..89 CDD:409358 2/4 (50%)
Vsig10NP_001258265.1 IG_like 60..145 CDD:214653
Ig strand B 66..70 CDD:409353
Ig strand C 80..83 CDD:409353
IG_like 165..246 CDD:214653 15/82 (18%)
Ig strand B 175..179 CDD:409570 1/3 (33%)
Ig strand C 188..195 CDD:409570 1/6 (17%)
Ig strand F 224..229 CDD:409570 2/4 (50%)
Ig strand G 237..240 CDD:409570 0/2 (0%)
I-set 344..429 CDD:400151 21/113 (19%)
Ig strand B 351..355 CDD:409353 1/4 (25%)
Ig strand C 365..369 CDD:409353 0/7 (0%)
Ig strand E 394..398 CDD:409353 0/3 (0%)
Ig strand F 409..414 CDD:409353 0/4 (0%)
Blue background indicates that the domain is not in the aligned region.

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